Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 LINC01144-201ENST00000626198 1710 ntBASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV9S1A1TA0A576 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 POU5F1P6-201ENST00000466990 990 ntBASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 AC107918.2-201ENST00000530817 355 ntBASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 AC093458.2-201ENST00000623150 629 ntBASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 AL805961.1-202ENST00000641562 540 ntBASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV9S1A1TA0A576 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV9S1A1TA0A576 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 ELK2BP-201ENST00000415014 1224 ntBASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 KRT18P35-201ENST00000510488 1269 ntBASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 AC006504.4-201ENST00000592118 1568 ntBASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TCRBV9S1A1TA0A576 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV9S1A1TA0A576 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms