Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 AC004706.3-202ENST00000621574 984 ntBASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
THUMPD1Q9NXG2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 MPDU1-223ENST00000582151 728 ntBASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 AL445228.2-201ENST00000605589 952 ntBASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 AC002310.6-201ENST00000624451 1377 ntBASIC15.71■□□□□ 0.11
THUMPD1Q9NXG2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
THUMPD1Q9NXG2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
THUMPD1Q9NXG2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
THUMPD1Q9NXG2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.71■□□□□ 0.1
THUMPD1Q9NXG2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 KRT18P31-201ENST00000506277 1292 ntBASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.7■□□□□ 0.1
THUMPD1Q9NXG2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms