Protein–RNA interactions for Protein: Q6NT52

CGB2, Choriogonadotropin subunit beta variant 2, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB2Q6NT52 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB2Q6NT52 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB2Q6NT52 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CGB2Q6NT52 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
CGB2Q6NT52 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB2Q6NT52 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB2Q6NT52 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.33■□□□□ 0.2
CGB2Q6NT52 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CGB2Q6NT52 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB2Q6NT52 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB2Q6NT52 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.33■□□□□ 0.2
CGB2Q6NT52 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CGB2Q6NT52 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 LINC00982-205ENST00000420957 435 ntBASIC16.32■□□□□ 0.2
CGB2Q6NT52 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 YBX1P2-201ENST00000489612 999 ntBASIC16.32■□□□□ 0.2
CGB2Q6NT52 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 AC139887.4-201ENST00000607877 719 ntBASIC16.32■□□□□ 0.2
CGB2Q6NT52 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.32■□□□□ 0.2
CGB2Q6NT52 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CGB2Q6NT52 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 LINC01144-201ENST00000626198 1710 ntBASIC16.31■□□□□ 0.2
CGB2Q6NT52 TMBIM7P-203ENST00000641617 1718 ntBASIC16.31■□□□□ 0.2
CGB2Q6NT52 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 TOP3BP1-201ENST00000420768 1380 ntBASIC16.31■□□□□ 0.2
CGB2Q6NT52 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 AC112907.2-201ENST00000448639 330 ntBASIC16.31■□□□□ 0.2
CGB2Q6NT52 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CGB2Q6NT52 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB2Q6NT52 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB2Q6NT52 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.3■□□□□ 0.2
CGB2Q6NT52 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.3■□□□□ 0.2
CGB2Q6NT52 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.3■□□□□ 0.2
CGB2Q6NT52 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.3■□□□□ 0.2
CGB2Q6NT52 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CGB2Q6NT52 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms