Protein–RNA interactions for Protein: Q6IQ49

SDE2, Protein SDE2 homolog, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2Q6IQ49 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 LINC00896-202ENST00000609602 2128 ntBASIC16.87■□□□□ 0.29
SDE2Q6IQ49 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 AC124947.2-201ENST00000547118 1133 ntBASIC16.87■□□□□ 0.29
SDE2Q6IQ49 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 AL138918.1-201ENST00000568306 659 ntBASIC16.87■□□□□ 0.29
SDE2Q6IQ49 MIR4453-201ENST00000584019 89 ntBASIC16.87■□□□□ 0.29
SDE2Q6IQ49 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 LINC02012-201ENST00000608206 1725 ntBASIC16.87■□□□□ 0.29
SDE2Q6IQ49 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SDE2Q6IQ49 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 AC097493.3-201ENST00000509725 367 ntBASIC16.86■□□□□ 0.29
SDE2Q6IQ49 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 AC003101.2-201ENST00000612557 442 ntBASIC16.86■□□□□ 0.29
SDE2Q6IQ49 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 AC108860.2-201ENST00000562760 2183 ntBASIC16.86■□□□□ 0.29
SDE2Q6IQ49 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SDE2Q6IQ49 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.85■□□□□ 0.29
SDE2Q6IQ49 AC068880.1-201ENST00000507289 2297 ntBASIC16.85■□□□□ 0.29
SDE2Q6IQ49 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.85■□□□□ 0.29
SDE2Q6IQ49 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms