Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN3P51790 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN3P51790 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN3P51790 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCN3P51790 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN3P51790 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN3P51790 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN3P51790 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLCN3P51790 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN3P51790 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN3P51790 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN3P51790 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLCN3P51790 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN3P51790 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN3P51790 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.23■□□□□ 0.51
CLCN3P51790 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN3P51790 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN3P51790 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CLCN3P51790 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN3P51790 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 AL031731.1-201ENST00000642131 2094 ntBASIC18.23■□□□□ 0.51
CLCN3P51790 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLCN3P51790 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLCN3P51790 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN3P51790 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN3P51790 IGHV3-42-201ENST00000520410 361 ntBASIC18.23■□□□□ 0.51
CLCN3P51790 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.23■□□□□ 0.51
CLCN3P51790 AC018529.1-201ENST00000613063 361 ntBASIC18.23■□□□□ 0.51
CLCN3P51790 AL390754.1-201ENST00000619088 582 ntBASIC18.23■□□□□ 0.51
CLCN3P51790 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN3P51790 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 RNF216P1-203ENST00000404404 2427 ntBASIC18.23■□□□□ 0.51
CLCN3P51790 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN3P51790 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN3P51790 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLCN3P51790 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLCN3P51790 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN3P51790 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLCN3P51790 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLCN3P51790 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLCN3P51790 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLCN3P51790 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.22■□□□□ 0.51
CLCN3P51790 AC003101.2-201ENST00000612557 442 ntBASIC18.22■□□□□ 0.51
CLCN3P51790 SPTSSB-204ENST00000617024 1292 ntBASIC18.22■□□□□ 0.51
CLCN3P51790 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CLCN3P51790 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN3P51790 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
CLCN3P51790 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN3P51790 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLCN3P51790 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN3P51790 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN3P51790 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN3P51790 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN3P51790 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCN3P51790 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN3P51790 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CLCN3P51790 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLCN3P51790 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN3P51790 AC069120.2-201ENST00000524091 540 ntBASIC18.21■□□□□ 0.51
CLCN3P51790 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.21■□□□□ 0.51
CLCN3P51790 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN3P51790 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.21■□□□□ 0.51
CLCN3P51790 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN3P51790 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN3P51790 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.21■□□□□ 0.51
CLCN3P51790 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN3P51790 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLCN3P51790 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms