Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC027307.2-201ENST00000591252 911 ntBASIC18.36■□□□□ 0.53
GPC3P51654 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.36■□□□□ 0.53
GPC3P51654 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GPC3P51654 AP001059.3-201ENST00000619053 235 ntBASIC18.36■□□□□ 0.53
GPC3P51654 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.36■□□□□ 0.53
GPC3P51654 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GPC3P51654 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
GPC3P51654 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC3P51654 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.35■□□□□ 0.53
GPC3P51654 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
GPC3P51654 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC3P51654 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
GPC3P51654 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.35■□□□□ 0.53
GPC3P51654 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GPC3P51654 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.35■□□□□ 0.53
GPC3P51654 FAM86GP-201ENST00000448322 971 ntBASIC18.35■□□□□ 0.53
GPC3P51654 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC3P51654 SLC25A39P2-201ENST00000537614 270 ntBASIC18.35■□□□□ 0.53
GPC3P51654 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.35■□□□□ 0.53
GPC3P51654 AP000842.3-202ENST00000569238 1080 ntBASIC18.35■□□□□ 0.53
GPC3P51654 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC3P51654 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
GPC3P51654 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GPC3P51654 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.35■□□□□ 0.53
GPC3P51654 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC3P51654 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
GPC3P51654 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 AL671710.1-201ENST00000610245 2349 ntBASIC18.34■□□□□ 0.53
GPC3P51654 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.34■□□□□ 0.53
GPC3P51654 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC3P51654 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 AC078925.2-201ENST00000624013 1973 ntBASIC18.34■□□□□ 0.53
GPC3P51654 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.34■□□□□ 0.53
GPC3P51654 MIR346-201ENST00000362234 95 ntBASIC18.34■□□□□ 0.53
GPC3P51654 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.34■□□□□ 0.53
GPC3P51654 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.34■□□□□ 0.53
GPC3P51654 SPDYE14P-201ENST00000442619 822 ntBASIC18.34■□□□□ 0.53
GPC3P51654 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC3P51654 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC3P51654 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC3P51654 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC3P51654 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 AL138918.1-201ENST00000568306 659 ntBASIC18.34■□□□□ 0.53
GPC3P51654 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC3P51654 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GPC3P51654 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC3P51654 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC3P51654 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC3P51654 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC3P51654 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC3P51654 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.33■□□□□ 0.53
GPC3P51654 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.33■□□□□ 0.53
GPC3P51654 RNF216P1-203ENST00000404404 2427 ntBASIC18.33■□□□□ 0.53
GPC3P51654 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC3P51654 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC3P51654 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
GPC3P51654 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC3P51654 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GPC3P51654 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.33■□□□□ 0.52
GPC3P51654 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GPC3P51654 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
GPC3P51654 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC3P51654 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.33■□□□□ 0.52
GPC3P51654 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.33■□□□□ 0.52
GPC3P51654 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.33■□□□□ 0.52
GPC3P51654 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms