Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CSNK1DP48730 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1DP48730 AC142381.1-201ENST00000426099 345 ntBASIC16.65■□□□□ 0.26
CSNK1DP48730 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.65■□□□□ 0.26
CSNK1DP48730 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.65■□□□□ 0.26
CSNK1DP48730 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 AC023141.5-201ENST00000458585 616 ntBASIC16.65■□□□□ 0.26
CSNK1DP48730 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.65■□□□□ 0.26
CSNK1DP48730 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.65■□□□□ 0.26
CSNK1DP48730 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.65■□□□□ 0.26
CSNK1DP48730 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.65■□□□□ 0.26
CSNK1DP48730 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1DP48730 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CSNK1DP48730 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1DP48730 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1DP48730 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.65■□□□□ 0.26
CSNK1DP48730 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSNK1DP48730 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CSNK1DP48730 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1DP48730 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.64■□□□□ 0.25
CSNK1DP48730 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.64■□□□□ 0.25
CSNK1DP48730 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1DP48730 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.64■□□□□ 0.25
CSNK1DP48730 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1DP48730 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.64■□□□□ 0.25
CSNK1DP48730 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.64■□□□□ 0.25
CSNK1DP48730 AC098859.1-201ENST00000502915 1238 ntBASIC16.64■□□□□ 0.25
CSNK1DP48730 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.64■□□□□ 0.25
CSNK1DP48730 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1DP48730 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1DP48730 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.64■□□□□ 0.25
CSNK1DP48730 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.64■□□□□ 0.25
CSNK1DP48730 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.64■□□□□ 0.25
CSNK1DP48730 AC027612.4-201ENST00000605371 583 ntBASIC16.64■□□□□ 0.25
CSNK1DP48730 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.64■□□□□ 0.25
CSNK1DP48730 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.64■□□□□ 0.25
CSNK1DP48730 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1DP48730 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1DP48730 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 PCDHA12-202ENST00000613593 2588 ntBASIC16.64■□□□□ 0.25
CSNK1DP48730 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.64■□□□□ 0.25
CSNK1DP48730 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1DP48730 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CSNK1DP48730 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.64■□□□□ 0.25
CSNK1DP48730 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1DP48730 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
CSNK1DP48730 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1DP48730 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1DP48730 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CSNK1DP48730 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1DP48730 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1DP48730 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1DP48730 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1DP48730 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1DP48730 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1DP48730 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1DP48730 HLA-J-203ENST00000494367 1087 ntBASIC16.63■□□□□ 0.25
CSNK1DP48730 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.63■□□□□ 0.25
CSNK1DP48730 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1DP48730 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1DP48730 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1DP48730 UXT-AS1-201ENST00000590504 1525 ntBASIC16.63■□□□□ 0.25
CSNK1DP48730 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1DP48730 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1DP48730 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1DP48730 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1DP48730 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms