Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO1P25800 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO1P25800 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LMO1P25800 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.02□□□□□ -0.17
LMO1P25800 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LMO1P25800 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
LMO1P25800 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 AL671710.1-201ENST00000610245 2349 ntBASIC14.01□□□□□ -0.17
LMO1P25800 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.01□□□□□ -0.17
LMO1P25800 AL031284.1-201ENST00000419297 478 ntBASIC14.01□□□□□ -0.17
LMO1P25800 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 PRSS29P-201ENST00000440800 595 ntBASIC14.01□□□□□ -0.17
LMO1P25800 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.01□□□□□ -0.17
LMO1P25800 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 AP002469.2-201ENST00000531724 424 ntBASIC14.01□□□□□ -0.17
LMO1P25800 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.01□□□□□ -0.17
LMO1P25800 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LMO1P25800 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.01□□□□□ -0.17
LMO1P25800 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LMO1P25800 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LMO1P25800 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LMO1P25800 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO1P25800 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14□□□□□ -0.17
LMO1P25800 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 CYP51A1P2-201ENST00000419457 1499 ntBASIC14□□□□□ -0.17
LMO1P25800 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LMO1P25800 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 ALOX12P2-203ENST00000570921 1945 ntBASIC14□□□□□ -0.17
LMO1P25800 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LMO1P25800 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14□□□□□ -0.17
LMO1P25800 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
LMO1P25800 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14□□□□□ -0.17
LMO1P25800 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14□□□□□ -0.17
LMO1P25800 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14□□□□□ -0.17
LMO1P25800 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 ATP6V0CP3-201ENST00000417255 467 ntBASIC14□□□□□ -0.17
LMO1P25800 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14□□□□□ -0.17
LMO1P25800 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14□□□□□ -0.17
LMO1P25800 FAM185BP-201ENST00000443595 716 ntBASIC14□□□□□ -0.17
LMO1P25800 AC108073.2-201ENST00000464002 357 ntBASIC14□□□□□ -0.17
LMO1P25800 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LMO1P25800 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO1P25800 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14□□□□□ -0.17
LMO1P25800 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
LMO1P25800 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14□□□□□ -0.17
LMO1P25800 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14□□□□□ -0.17
LMO1P25800 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14□□□□□ -0.17
LMO1P25800 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14□□□□□ -0.17
LMO1P25800 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14□□□□□ -0.17
LMO1P25800 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14□□□□□ -0.17
LMO1P25800 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms