Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNA2P20248 KLF4P1-201ENST00000412782 1185 ntBASIC15.81■□□□□ 0.12
CCNA2P20248 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCNA2P20248 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CCNA2P20248 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA2P20248 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNA2P20248 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNA2P20248 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA2P20248 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNA2P20248 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCNA2P20248 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNA2P20248 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.81■□□□□ 0.12
CCNA2P20248 STK25P1-201ENST00000585406 838 ntBASIC15.81■□□□□ 0.12
CCNA2P20248 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA2P20248 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCNA2P20248 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.81■□□□□ 0.12
CCNA2P20248 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCNA2P20248 AC132938.5-201ENST00000624980 1813 ntBASIC15.81■□□□□ 0.12
CCNA2P20248 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 NORAD-201ENST00000565493 5339 ntBASIC15.81■□□□□ 0.12
CCNA2P20248 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCNA2P20248 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCNA2P20248 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCNA2P20248 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCNA2P20248 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.81■□□□□ 0.12
CCNA2P20248 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA2P20248 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.8■□□□□ 0.12
CCNA2P20248 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.8■□□□□ 0.12
CCNA2P20248 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCNA2P20248 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CCNA2P20248 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CCNA2P20248 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 AL353593.2-201ENST00000602529 1483 ntBASIC15.8■□□□□ 0.12
CCNA2P20248 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA2P20248 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA2P20248 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA2P20248 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
CCNA2P20248 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA2P20248 AC132008.2-207ENST00000454517 770 ntBASIC15.8■□□□□ 0.12
CCNA2P20248 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.8■□□□□ 0.12
CCNA2P20248 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.8■□□□□ 0.12
CCNA2P20248 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.8■□□□□ 0.12
CCNA2P20248 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.8■□□□□ 0.12
CCNA2P20248 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA2P20248 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCNA2P20248 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA2P20248 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCNA2P20248 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.8■□□□□ 0.12
CCNA2P20248 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CCNA2P20248 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCNA2P20248 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.8■□□□□ 0.12
CCNA2P20248 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCNA2P20248 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA2P20248 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA2P20248 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.79■□□□□ 0.12
CCNA2P20248 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA2P20248 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CCNA2P20248 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA2P20248 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA2P20248 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.79■□□□□ 0.12
CCNA2P20248 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA2P20248 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA2P20248 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCNA2P20248 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CCNA2P20248 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.79■□□□□ 0.12
CCNA2P20248 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms