Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.1■□□□□ 0.17
AP4B1Q9Y6B7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP4B1Q9Y6B7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
AP4B1Q9Y6B7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 AC096633.1-201ENST00000422446 749 ntBASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 DUSP5P1-201ENST00000441325 1139 ntBASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 KRT16P4-201ENST00000453883 522 ntBASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 FOSL1P1-201ENST00000511041 816 ntBASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 KRT126P-201ENST00000549467 1181 ntBASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
AP4B1Q9Y6B7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms