Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 LINC02228-204ENST00000642115 2962 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
LCE3DQ9BYE3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
LCE3DQ9BYE3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
LCE3DQ9BYE3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 AC022532.1-201ENST00000624563 1728 ntBASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 MESTP1-201ENST00000404287 994 ntBASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 CRYGFP-201ENST00000418459 633 ntBASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 SLC25A1P2-201ENST00000430693 912 ntBASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 AC026366.1-201ENST00000488803 879 ntBASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 PPP1R14BP3-201ENST00000509033 445 ntBASIC4.52□□□□□ -1.69
LCE3DQ9BYE3 AC112698.1-201ENST00000510299 916 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms