Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC38A9Q8NBW4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC38A9Q8NBW4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC38A9Q8NBW4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC38A9Q8NBW4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC38A9Q8NBW4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC38A9Q8NBW4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SLC38A9Q8NBW4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC38A9Q8NBW4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC38A9Q8NBW4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 AL391256.1-201ENST00000443260 1855 ntBASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 AP3S2-216ENST00000617003 1561 ntBASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 RNA5SP421-201ENST00000516864 134 ntBASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 AC073439.1-201ENST00000624121 1774 ntBASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC38A9Q8NBW4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 PRYP6-201ENST00000514804 343 ntBASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 RARRES2P9-201ENST00000565168 469 ntBASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 MIR4745-201ENST00000577608 62 ntBASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SLC38A9Q8NBW4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC38A9Q8NBW4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms