Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 AL139400.1-201ENST00000366220 510 ntBASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 FAM58DP-201ENST00000428076 619 ntBASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 GPS2P2-201ENST00000430745 888 ntBASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 AL592309.1-201ENST00000443127 649 ntBASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 KRT18P34-201ENST00000488218 1270 ntBASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.7■□□□□ 0.1
ARHGEF39Q8N4T4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 AC142381.1-201ENST00000426099 345 ntBASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 AP000842.3-202ENST00000569238 1080 ntBASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 AC009093.7-201ENST00000623853 1223 ntBASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 AC011676.5-201ENST00000624864 2660 ntBASIC15.69■□□□□ 0.1
ARHGEF39Q8N4T4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 AC073439.1-201ENST00000624121 1774 ntBASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 AC023141.5-201ENST00000458585 616 ntBASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.68■□□□□ 0.1
ARHGEF39Q8N4T4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms