Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC60Q8IWA6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 MIR770-201ENST00000390219 98 ntBASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 AC005498.2-205ENST00000593218 784 ntBASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 AL390955.2-201ENST00000603032 514 ntBASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 AC022211.2-201ENST00000585075 2527 ntBASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 TUBB3P1-201ENST00000405796 1332 ntBASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 AC006538.1-201ENST00000567905 1585 ntBASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC60Q8IWA6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 GPAA1P2-202ENST00000606848 1787 ntBASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 AC067863.1-201ENST00000494933 530 ntBASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 MIR6080-201ENST00000617359 66 ntBASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC60Q8IWA6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC60Q8IWA6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
CCDC60Q8IWA6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC60Q8IWA6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
CCDC60Q8IWA6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 AP3S2-216ENST00000617003 1561 ntBASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC60Q8IWA6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms