Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 NFIC-211ENST00000641145 8399 ntBASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 INGX-201ENST00000359239 846 ntBASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 AC024563.2-201ENST00000603282 481 ntBASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 AC009154.2-201ENST00000621177 724 ntBASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD2Q8IV50 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 AL390955.1-201ENST00000428694 934 ntBASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LYSMD2Q8IV50 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms