Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.42■□□□□ 0.86
ATP2B3Q16720 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 KRT18P34-201ENST00000488218 1270 ntBASIC20.41■□□□□ 0.86
ATP2B3Q16720 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 AC084121.4-201ENST00000641598 221 ntBASIC20.41■□□□□ 0.86
ATP2B3Q16720 AF228730.8-201ENST00000642140 221 ntBASIC20.41■□□□□ 0.86
ATP2B3Q16720 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.41■□□□□ 0.86
ATP2B3Q16720 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2B3Q16720 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 AP000842.3-202ENST00000569238 1080 ntBASIC20.4■□□□□ 0.86
ATP2B3Q16720 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ATP2B3Q16720 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2B3Q16720 AC005915.1-201ENST00000624912 2018 ntBASIC20.39■□□□□ 0.86
ATP2B3Q16720 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
ATP2B3Q16720 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2B3Q16720 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2B3Q16720 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2B3Q16720 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.39■□□□□ 0.86
ATP2B3Q16720 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B3Q16720 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATP2B3Q16720 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
ATP2B3Q16720 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B3Q16720 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B3Q16720 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B3Q16720 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B3Q16720 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2B3Q16720 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.39■□□□□ 0.85
ATP2B3Q16720 SLC25A39P2-201ENST00000537614 270 ntBASIC20.39■□□□□ 0.85
ATP2B3Q16720 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2B3Q16720 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ATP2B3Q16720 AC025678.2-201ENST00000562061 970 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms