Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNB1P98172 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNB1P98172 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.91□□□□□ -0.02
EFNB1P98172 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNB1P98172 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
EFNB1P98172 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.91□□□□□ -0.02
EFNB1P98172 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.91□□□□□ -0.02
EFNB1P98172 AL591684.3-201ENST00000605187 298 ntBASIC14.91□□□□□ -0.02
EFNB1P98172 NPAP1P7-201ENST00000613027 823 ntBASIC14.91□□□□□ -0.02
EFNB1P98172 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
EFNB1P98172 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
EFNB1P98172 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
EFNB1P98172 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
EFNB1P98172 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
EFNB1P98172 AL592424.1-201ENST00000563624 1536 ntBASIC14.91□□□□□ -0.02
EFNB1P98172 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
EFNB1P98172 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.91□□□□□ -0.02
EFNB1P98172 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.9□□□□□ -0.02
EFNB1P98172 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.9□□□□□ -0.02
EFNB1P98172 AC006058.4-201ENST00000624016 1670 ntBASIC14.9□□□□□ -0.02
EFNB1P98172 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
EFNB1P98172 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.9□□□□□ -0.02
EFNB1P98172 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
EFNB1P98172 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.9□□□□□ -0.02
EFNB1P98172 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.9□□□□□ -0.02
EFNB1P98172 TMPOP1-202ENST00000424642 1267 ntBASIC14.9□□□□□ -0.02
EFNB1P98172 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
EFNB1P98172 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.9□□□□□ -0.02
EFNB1P98172 KRT16P4-201ENST00000453883 522 ntBASIC14.9□□□□□ -0.02
EFNB1P98172 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
EFNB1P98172 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.9□□□□□ -0.02
EFNB1P98172 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.9□□□□□ -0.02
EFNB1P98172 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.9□□□□□ -0.02
EFNB1P98172 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.9□□□□□ -0.02
EFNB1P98172 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.9□□□□□ -0.02
EFNB1P98172 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.9□□□□□ -0.02
EFNB1P98172 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
EFNB1P98172 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.9□□□□□ -0.02
EFNB1P98172 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
EFNB1P98172 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.89□□□□□ -0.03
EFNB1P98172 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNB1P98172 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
EFNB1P98172 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
EFNB1P98172 PPT1-215ENST00000641471 2368 ntBASIC14.89□□□□□ -0.03
EFNB1P98172 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
EFNB1P98172 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
EFNB1P98172 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNB1P98172 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
EFNB1P98172 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.89□□□□□ -0.03
EFNB1P98172 PTCHD3P3-201ENST00000403073 906 ntBASIC14.89□□□□□ -0.03
EFNB1P98172 PCED1CP-201ENST00000419887 785 ntBASIC14.89□□□□□ -0.03
EFNB1P98172 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNB1P98172 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 AC107918.2-201ENST00000530817 355 ntBASIC14.89□□□□□ -0.03
EFNB1P98172 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.89□□□□□ -0.03
EFNB1P98172 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNB1P98172 AC099336.1-202ENST00000602961 463 ntBASIC14.89□□□□□ -0.03
EFNB1P98172 AC004706.3-202ENST00000621574 984 ntBASIC14.89□□□□□ -0.03
EFNB1P98172 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.89□□□□□ -0.03
EFNB1P98172 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.89□□□□□ -0.03
EFNB1P98172 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.89□□□□□ -0.03
EFNB1P98172 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
EFNB1P98172 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms