Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.55■□□□□ 0.72
RHBDL3P58872 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.55■□□□□ 0.72
RHBDL3P58872 SPTLC1P1-201ENST00000447199 261 ntBASIC19.55■□□□□ 0.72
RHBDL3P58872 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.55■□□□□ 0.72
RHBDL3P58872 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.55■□□□□ 0.72
RHBDL3P58872 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RHBDL3P58872 AC008738.7-201ENST00000609744 511 ntBASIC19.55■□□□□ 0.72
RHBDL3P58872 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDL3P58872 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RHBDL3P58872 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.55■□□□□ 0.72
RHBDL3P58872 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.55■□□□□ 0.72
RHBDL3P58872 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.54■□□□□ 0.72
RHBDL3P58872 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RHBDL3P58872 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.54■□□□□ 0.72
RHBDL3P58872 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RHBDL3P58872 AC078925.2-201ENST00000624013 1973 ntBASIC19.54■□□□□ 0.72
RHBDL3P58872 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.54■□□□□ 0.72
RHBDL3P58872 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.54■□□□□ 0.72
RHBDL3P58872 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.54■□□□□ 0.72
RHBDL3P58872 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RHBDL3P58872 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.54■□□□□ 0.72
RHBDL3P58872 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.54■□□□□ 0.72
RHBDL3P58872 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.54■□□□□ 0.72
RHBDL3P58872 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.54■□□□□ 0.72
RHBDL3P58872 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RHBDL3P58872 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RHBDL3P58872 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.53■□□□□ 0.72
RHBDL3P58872 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RHBDL3P58872 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.53■□□□□ 0.72
RHBDL3P58872 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RHBDL3P58872 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.53■□□□□ 0.72
RHBDL3P58872 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 CRB3P1-201ENST00000449338 276 ntBASIC19.53■□□□□ 0.72
RHBDL3P58872 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.53■□□□□ 0.72
RHBDL3P58872 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.53■□□□□ 0.72
RHBDL3P58872 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.53■□□□□ 0.72
RHBDL3P58872 AC009118.2-201ENST00000613275 655 ntBASIC19.53■□□□□ 0.72
RHBDL3P58872 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.53■□□□□ 0.72
RHBDL3P58872 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RHBDL3P58872 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RHBDL3P58872 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.53■□□□□ 0.72
RHBDL3P58872 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
RHBDL3P58872 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RHBDL3P58872 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RHBDL3P58872 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RHBDL3P58872 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDL3P58872 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDL3P58872 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.52■□□□□ 0.72
RHBDL3P58872 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
RHBDL3P58872 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.52■□□□□ 0.72
RHBDL3P58872 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.52■□□□□ 0.72
RHBDL3P58872 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RHBDL3P58872 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDL3P58872 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDL3P58872 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDL3P58872 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDL3P58872 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.52■□□□□ 0.72
RHBDL3P58872 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RHBDL3P58872 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.52■□□□□ 0.72
RHBDL3P58872 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.52■□□□□ 0.72
RHBDL3P58872 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.52■□□□□ 0.72
RHBDL3P58872 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.52■□□□□ 0.72
RHBDL3P58872 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDL3P58872 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.52■□□□□ 0.72
RHBDL3P58872 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RHBDL3P58872 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.52■□□□□ 0.72
RHBDL3P58872 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.52■□□□□ 0.72
RHBDL3P58872 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RHBDL3P58872 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.52■□□□□ 0.72
RHBDL3P58872 AC239800.4-201ENST00000603712 296 ntBASIC19.52■□□□□ 0.72
RHBDL3P58872 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDL3P58872 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.52■□□□□ 0.72
RHBDL3P58872 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RHBDL3P58872 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RHBDL3P58872 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RHBDL3P58872 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms