Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC1A3P43003 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC1A3P43003 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC1A3P43003 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC1A3P43003 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC1A3P43003 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
SLC1A3P43003 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
SLC1A3P43003 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SLC1A3P43003 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
SLC1A3P43003 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC1A3P43003 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC1A3P43003 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC1A3P43003 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC1A3P43003 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A3P43003 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A3P43003 AC013467.2-201ENST00000605472 835 ntBASIC15.39■□□□□ 0.05
SLC1A3P43003 AC008667.4-201ENST00000607370 168 ntBASIC15.39■□□□□ 0.05
SLC1A3P43003 AL773604.1-201ENST00000617417 272 ntBASIC15.39■□□□□ 0.05
SLC1A3P43003 AC148477.8-201ENST00000624298 468 ntBASIC15.39■□□□□ 0.05
SLC1A3P43003 AC005593.1-201ENST00000624894 515 ntBASIC15.39■□□□□ 0.05
SLC1A3P43003 FAM215A-202ENST00000632077 792 ntBASIC15.39■□□□□ 0.05
SLC1A3P43003 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC1A3P43003 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC1A3P43003 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A3P43003 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC1A3P43003 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
SLC1A3P43003 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC1A3P43003 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
SLC1A3P43003 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
SLC1A3P43003 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC1A3P43003 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SLC1A3P43003 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC1A3P43003 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC1A3P43003 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC1A3P43003 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC1A3P43003 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC1A3P43003 IGHV3-65-201ENST00000523210 341 ntBASIC15.38■□□□□ 0.05
SLC1A3P43003 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 AC012640.2-201ENST00000561606 901 ntBASIC15.38■□□□□ 0.05
SLC1A3P43003 REXO1L3P-201ENST00000622202 1288 ntBASIC15.38■□□□□ 0.05
SLC1A3P43003 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SLC1A3P43003 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC1A3P43003 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 AC006277.1-201ENST00000624348 1610 ntBASIC15.38■□□□□ 0.05
SLC1A3P43003 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
SLC1A3P43003 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC1A3P43003 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SLC1A3P43003 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC1A3P43003 HLA-A-202ENST00000376806 1854 ntBASIC15.37■□□□□ 0.05
SLC1A3P43003 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC1A3P43003 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SLC1A3P43003 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC1A3P43003 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC1A3P43003 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
SLC1A3P43003 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC1A3P43003 FER1L4-210ENST00000615531 5998 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms