Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.92■□□□□ 0.3
HADHAP40939 HLA-A-201ENST00000376802 1334 ntBASIC16.92■□□□□ 0.3
HADHAP40939 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HADHAP40939 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
HADHAP40939 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.91■□□□□ 0.3
HADHAP40939 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
HADHAP40939 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.91■□□□□ 0.3
HADHAP40939 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.91■□□□□ 0.3
HADHAP40939 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
HADHAP40939 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 AL513523.2-202ENST00000427283 2040 ntBASIC16.91■□□□□ 0.3
HADHAP40939 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.91■□□□□ 0.3
HADHAP40939 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.91■□□□□ 0.3
HADHAP40939 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HADHAP40939 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.91■□□□□ 0.3
HADHAP40939 AC098831.1-202ENST00000438821 336 ntBASIC16.91■□□□□ 0.3
HADHAP40939 AC108073.2-201ENST00000464002 357 ntBASIC16.91■□□□□ 0.3
HADHAP40939 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.91■□□□□ 0.3
HADHAP40939 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.91■□□□□ 0.3
HADHAP40939 AC013467.2-201ENST00000605472 835 ntBASIC16.91■□□□□ 0.3
HADHAP40939 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HADHAP40939 REXO1L3P-201ENST00000622202 1288 ntBASIC16.91■□□□□ 0.3
HADHAP40939 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.91■□□□□ 0.3
HADHAP40939 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HADHAP40939 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.9■□□□□ 0.3
HADHAP40939 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HADHAP40939 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.9■□□□□ 0.3
HADHAP40939 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HADHAP40939 AC091167.2-201ENST00000579581 588 ntBASIC16.9■□□□□ 0.3
HADHAP40939 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.9■□□□□ 0.3
HADHAP40939 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.9■□□□□ 0.3
HADHAP40939 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HADHAP40939 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.9■□□□□ 0.3
HADHAP40939 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HADHAP40939 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
HADHAP40939 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
HADHAP40939 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
HADHAP40939 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
HADHAP40939 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HADHAP40939 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HADHAP40939 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.89■□□□□ 0.29
HADHAP40939 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms