Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 NHP2-205ENST00000511078 475 ntTSL 216.08■□□□□ 0.162e-7■■□□□ 13.9
RPS3P23396 NHP2-204ENST00000510363 566 ntTSL 1 (best)15.24■□□□□ 0.032e-7■■□□□ 13.9
RPS3P23396 MRPL24-203ENST00000412846 514 ntTSL 314.8□□□□□ -0.042e-6■■□□□ 13.9
RPS3P23396 UBE2M-203ENST00000595957 734 ntTSL 214.56□□□□□ -0.081e-14■■□□□ 13.9
RPS3P23396 SLC43A3-209ENST00000528098 1260 ntTSL 214.43□□□□□ -0.12e-6■■□□□ 13.9
RPS3P23396 SLC43A3-211ENST00000529112 653 ntTSL 513.99□□□□□ -0.172e-6■■□□□ 13.9
RPS3P23396 SLC43A3-221ENST00000532795 587 ntTSL 413.93□□□□□ -0.182e-6■■□□□ 13.9
RPS3P23396 SLC43A3-223ENST00000533235 581 ntTSL 513.93□□□□□ -0.182e-6■■□□□ 13.9
RPS3P23396 SLC43A3-222ENST00000533051 571 ntTSL 213.87□□□□□ -0.192e-6■■□□□ 13.9
RPS3P23396 NHP2-206ENST00000514354 472 ntTSL 313.83□□□□□ -0.22e-7■■□□□ 13.9
RPS3P23396 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.22e-6■■□□□ 13.9
RPS3P23396 TIMM50-212ENST00000599733 669 ntTSL 313.69□□□□□ -0.222e-6■■□□□ 13.9
RPS3P23396 CDCA5-204ENST00000479032 1004 ntTSL 1 (best)13.68□□□□□ -0.222e-6■■□□□ 13.9
RPS3P23396 SLC43A3-204ENST00000524863 539 ntTSL 313.33□□□□□ -0.282e-6■■□□□ 13.9
RPS3P23396 SLC43A3-208ENST00000526621 562 ntTSL 413.33□□□□□ -0.282e-6■■□□□ 13.9
RPS3P23396 CDCA5-209ENST00000531401 858 ntTSL 513.02□□□□□ -0.332e-6■■□□□ 13.9
RPS3P23396 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.82□□□□□ -0.362e-7■■□□□ 13.9
RPS3P23396 SLC43A3-216ENST00000529896 494 ntTSL 412.61□□□□□ -0.392e-6■■□□□ 13.9
RPS3P23396 MRPL24-201ENST00000361531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.422e-6■■□□□ 13.9
RPS3P23396 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.452e-7■■□□□ 13.9
RPS3P23396 USP14-206ENST00000580410 474 ntTSL 411.67□□□□□ -0.549e-12■■□□□ 13.9
RPS3P23396 SLC25A40-203ENST00000444363 702 ntTSL 311.3□□□□□ -0.62e-6■■□□□ 13.9
RPS3P23396 SLC25A40-207ENST00000491499 499 ntTSL 311.3□□□□□ -0.62e-6■■□□□ 13.9
RPS3P23396 MRPL24-205ENST00000434558 990 ntTSL 510.97□□□□□ -0.652e-6■■□□□ 13.9
RPS3P23396 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.722e-6■■□□□ 13.9
RPS3P23396 ZBTB34-201ENST00000319119 6564 ntTSL 1 (best) BASIC10.32□□□□□ -0.762e-6■■□□□ 13.9
RPS3P23396 SLC43A3-218ENST00000530232 389 ntTSL 310.31□□□□□ -0.762e-6■■□□□ 13.9
RPS3P23396 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.822e-6■■□□□ 13.9
RPS3P23396 NUB1-207ENST00000480714 586 ntTSL 29.77□□□□□ -0.852e-6■■□□□ 13.9
RPS3P23396 SLC43A3-206ENST00000525474 801 ntTSL 59.6□□□□□ -0.872e-6■■□□□ 13.9
RPS3P23396 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC9.58□□□□□ -0.882e-6■■□□□ 13.9
RPS3P23396 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC9.04□□□□□ -0.962e-6■■□□□ 13.9
RPS3P23396 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC8.79□□□□□ -12e-6■■□□□ 13.9
RPS3P23396 PEX14-203ENST00000491661 637 ntTSL 28.74□□□□□ -1.012e-6■■□□□ 13.9
RPS3P23396 NUB1-211ENST00000497987 861 ntTSL 28.59□□□□□ -1.032e-6■■□□□ 13.9
RPS3P23396 EEF1E1-203ENST00000488226 443 ntTSL 28.2□□□□□ -1.12e-6■■□□□ 13.9
RPS3P23396 RNH1-221ENST00000532055 704 ntTSL 38.07□□□□□ -1.122e-6■■□□□ 13.9
RPS3P23396 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.54□□□□□ -1.22e-6■■□□□ 13.9
RPS3P23396 MLH1-213ENST00000456676 2230 ntTSL 1 (best)7.39□□□□□ -1.232e-6■■□□□ 13.9
RPS3P23396 MRPL24-204ENST00000420938 448 ntTSL 37.21□□□□□ -1.262e-6■■□□□ 13.9
RPS3P23396 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.352e-6■■□□□ 13.9
RPS3P23396 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.16□□□□□ -1.422e-6■■□□□ 13.9
RPS3P23396 DHX15-209ENST00000513036 1848 ntTSL 26.12□□□□□ -1.432e-6■■□□□ 13.9
RPS3P23396 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.67□□□□□ -1.52e-6■■□□□ 13.9
RPS3P23396 MLH1-215ENST00000458009 660 ntTSL 1 (best)5.58□□□□□ -1.522e-6■■□□□ 13.9
RPS3P23396 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.09□□□□□ -1.592e-6■■□□□ 13.9
RPS3P23396 MLH1-202ENST00000413212 684 ntTSL 54.32□□□□□ -1.722e-6■■□□□ 13.9
RPS3P23396 MLH1-203ENST00000413740 342 ntTSL 1 (best)4.17□□□□□ -1.742e-6■■□□□ 13.9
RPS3P23396 MLH1-223ENST00000616768 721 ntTSL 24.17□□□□□ -1.742e-6■■□□□ 13.9
RPS3P23396 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.12□□□□□ -1.752e-6■■□□□ 13.9
RPS3P23396 DHX15-204ENST00000508032 3028 ntTSL 1 (best)3.83□□□□□ -1.82e-6■■□□□ 13.9
RPS3P23396 MLH1-210ENST00000450420 233 ntTSL 1 (best)3.36□□□□□ -1.872e-6■■□□□ 13.9
RPS3P23396 DHX15-206ENST00000510645 470 ntTSL 52.39□□□□□ -2.032e-6■■□□□ 13.9
RPS3P23396 LTA4H-205ENST00000547982 986 ntTSL 1 (best)2.33□□□□□ -2.042e-6■■□□□ 13.9
RPS3P23396 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.092e-6■■□□□ 13.9
RPS3P23396 DHX15-203ENST00000504279 761 ntTSL 21.95□□□□□ -2.12e-6■■□□□ 13.9
RPS3P23396 NUB1-208ENST00000480907 977 ntTSL 51.88□□□□□ -2.112e-6■■□□□ 13.9
RPS3P23396 LTA4H-206ENST00000548375 639 ntTSL 51.72□□□□□ -2.132e-6■■□□□ 13.9
RPS3P23396 USP14-209ENST00000583119 578 ntTSL 51.6□□□□□ -2.159e-12■■□□□ 13.9
RPS3P23396 DHX15-208ENST00000512903 2071 ntTSL 20.67□□□□□ -2.32e-6■■□□□ 13.9
RPS3P23396 DHX15-205ENST00000508368 415 ntTSL 20.56□□□□□ -2.322e-6■■□□□ 13.9
RPS3P23396 CFH-205ENST00000496761 550 ntTSL 20.43□□□□□ -2.342e-6■■□□□ 13.9
RPS3P23396 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.453e-32■■□□□ 13.9
RPS3P23396 CLSTN1-203ENST00000435891 3829 ntTSL 210.17□□□□□ -0.782e-8■■□□□ 13.9
RPS3P23396 RACK1-223ENST00000510199 1100 ntTSL 311.83□□□□□ -0.522e-11■■□□□ 13.9
RPS3P23396 RACK1-214ENST00000507000 685 ntTSL 56.79□□□□□ -1.322e-11■■□□□ 13.9
RPS3P23396 ACTN1-207ENST00000553290 619 ntTSL 512.54□□□□□ -0.42e-7■■□□□ 13.9
RPS3P23396 ACTN1-206ENST00000544964 891 ntTSL 512.14□□□□□ -0.472e-7■■□□□ 13.9
RPS3P23396 SEC61A1-205ENST00000483956 3046 ntTSL 1 (best)11.25□□□□□ -0.612e-7■■□□□ 13.9
RPS3P23396 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.226e-11■■□□□ 13.9
RPS3P23396 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.486e-11■■□□□ 13.9
RPS3P23396 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.596e-11■■□□□ 13.9
RPS3P23396 ACAA1-206ENST00000423611 877 ntTSL 319.58■□□□□ 0.725e-8■■□□□ 13.9
RPS3P23396 ACAA1-204ENST00000418880 737 ntTSL 319.34■□□□□ 0.695e-8■■□□□ 13.9
RPS3P23396 ACAA1-208ENST00000447223 915 ntTSL 315.03■□□□□ -05e-8■■□□□ 13.9
RPS3P23396 PRKCSH-218ENST00000593053 588 ntTSL 512.62□□□□□ -0.398e-8■■□□□ 13.9
RPS3P23396 PRKCSH-206ENST00000587509 545 ntTSL 411.42□□□□□ -0.588e-8■■□□□ 13.9
RPS3P23396 NSFL1C-204ENST00000461211 3799 ntTSL 56.75□□□□□ -1.332e-6■■□□□ 13.9
RPS3P23396 ACTG1-204ENST00000571721 813 ntTSL 518.02■□□□□ 0.488e-25■■□□□ 13.9
RPS3P23396 ACTG1-202ENST00000570382 471 ntTSL 412.71□□□□□ -0.378e-25■■□□□ 13.9
RPS3P23396 TM7SF2-213ENST00000529233 756 ntTSL 317.7■□□□□ 0.421e-11■■□□□ 13.9
RPS3P23396 TM7SF2-222ENST00000532328 560 ntTSL 315.94■□□□□ 0.141e-11■■□□□ 13.9
RPS3P23396 TM7SF2-212ENST00000528802 692 ntTSL 315.71■□□□□ 0.111e-11■■□□□ 13.9
RPS3P23396 SGSH-216ENST00000576856 818 ntTSL 313.95□□□□□ -0.181e-11■■□□□ 13.9
RPS3P23396 SGSH-209ENST00000572257 581 ntTSL 410.72□□□□□ -0.691e-11■■□□□ 13.9
RPS3P23396 TM7SF2-210ENST00000527968 544 ntTSL 310.5□□□□□ -0.731e-11■■□□□ 13.9
RPS3P23396 ATP7B-216ENST00000635406 506 ntTSL 420.39■□□□□ 0.854e-8■■□□□ 13.9
RPS3P23396 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.824e-8■■□□□ 13.9
RPS3P23396 LETM1-202ENST00000466175 1626 ntTSL 218.17■□□□□ 0.54e-8■■□□□ 13.9
RPS3P23396 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.69■□□□□ 0.424e-8■■□□□ 13.9
RPS3P23396 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.01■□□□□ 0.314e-8■■□□□ 13.9
RPS3P23396 TBRG4-205ENST00000471142 544 ntTSL 416.72■□□□□ 0.274e-8■■□□□ 13.9
RPS3P23396 TBRG4-216ENST00000495078 548 ntTSL 416.72■□□□□ 0.274e-8■■□□□ 13.9
RPS3P23396 ATP7B-208ENST00000482841 1845 ntTSL 216.29■□□□□ 0.24e-8■■□□□ 13.9
RPS3P23396 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.14e-8■■□□□ 13.9
RPS3P23396 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.044e-8■■□□□ 13.9
RPS3P23396 TBRG4-204ENST00000461363 856 ntTSL 215.22■□□□□ 0.034e-8■■□□□ 13.9
RPS3P23396 LETM1-203ENST00000505551 2710 ntTSL 1 (best)12.87□□□□□ -0.354e-8■■□□□ 13.9
RPS3P23396 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.65□□□□□ -0.384e-8■■□□□ 13.9
RPS3P23396 TBRG4-209ENST00000478532 945 ntTSL 512.58□□□□□ -0.44e-8■■□□□ 13.9
Retrieved 100 of 24,271 protein–RNA pairs in 316 ms