RNA–Protein interactions for RNA: ENST00000536378.5

MLH1-221, Transcript of mutL homolog 1, humanhuman

TSL 2 BASIC

Gene MLH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH1-221ENST00000536378 NISCHQ9Y2I1 1504 aa23.44■■□□□ 1.34
MLH1-221ENST00000536378 CCDC180Q9P1Z9 1646 aa20.85■□□□□ 0.93
MLH1-221ENST00000536378 ABCC9O60706 1549 aa20.02■□□□□ 0.8
MLH1-221ENST00000536378 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.73
MLH1-221ENST00000536378 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
MLH1-221ENST00000536378 NACADO15069 1562 aa19.52■□□□□ 0.72
MLH1-221ENST00000536378 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
MLH1-221ENST00000536378 RB1CC1Q8TDY2 1594 aa19.46■□□□□ 0.71
MLH1-221ENST00000536378 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
MLH1-221ENST00000536378 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
MLH1-221ENST00000536378 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
MLH1-221ENST00000536378 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
MLH1-221ENST00000536378 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
MLH1-221ENST00000536378 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
MLH1-221ENST00000536378 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
MLH1-221ENST00000536378 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
MLH1-221ENST00000536378 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
MLH1-221ENST00000536378 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
MLH1-221ENST00000536378 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
MLH1-221ENST00000536378 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
MLH1-221ENST00000536378 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
MLH1-221ENST00000536378 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
MLH1-221ENST00000536378 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
MLH1-221ENST00000536378 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
MLH1-221ENST00000536378 NCAPD3P42695 1498 aa17.99■□□□□ 0.47
MLH1-221ENST00000536378 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
MLH1-221ENST00000536378 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.46
MLH1-221ENST00000536378 WIZO95785 1651 aa17.84■□□□□ 0.45
MLH1-221ENST00000536378 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
MLH1-221ENST00000536378 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
MLH1-221ENST00000536378 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
MLH1-221ENST00000536378 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
MLH1-221ENST00000536378 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
MLH1-221ENST00000536378 CFTRP13569 1480 aa17.39■□□□□ 0.37
MLH1-221ENST00000536378 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
MLH1-221ENST00000536378 NESP48681 1621 aa17.39■□□□□ 0.37
MLH1-221ENST00000536378 PRDM2Q13029 1718 aa17.36■□□□□ 0.37
MLH1-221ENST00000536378 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
MLH1-221ENST00000536378 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
MLH1-221ENST00000536378 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
MLH1-221ENST00000536378 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
MLH1-221ENST00000536378 THOC2Q8NI27 1593 aaKnown RBP17.2■□□□□ 0.34
MLH1-221ENST00000536378 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
MLH1-221ENST00000536378 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
MLH1-221ENST00000536378 CUX2O14529 1486 aa17.12■□□□□ 0.33
MLH1-221ENST00000536378 WDR62O43379 1518 aa17.11■□□□□ 0.33
MLH1-221ENST00000536378 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
MLH1-221ENST00000536378 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
MLH1-221ENST00000536378 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
MLH1-221ENST00000536378 TOPBP1Q92547 1522 aa16.98■□□□□ 0.31
MLH1-221ENST00000536378 CUX1P39880 1505 aa16.92■□□□□ 0.3
MLH1-221ENST00000536378 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
MLH1-221ENST00000536378 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
MLH1-221ENST00000536378 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
MLH1-221ENST00000536378 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
MLH1-221ENST00000536378 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
MLH1-221ENST00000536378 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
MLH1-221ENST00000536378 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
MLH1-221ENST00000536378 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
MLH1-221ENST00000536378 WDR97A6NE52 1622 aa16.79■□□□□ 0.28
MLH1-221ENST00000536378 SOGA1O94964 1423 aa16.75■□□□□ 0.27
MLH1-221ENST00000536378 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
MLH1-221ENST00000536378 ABCA10Q8WWZ4 1543 aa16.71■□□□□ 0.27
MLH1-221ENST00000536378 ZNF608Q9ULD9 1512 aaPredicted RBP16.68■□□□□ 0.26
MLH1-221ENST00000536378 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
MLH1-221ENST00000536378 ABCA5Q8WWZ7 1642 aa16.64■□□□□ 0.25
MLH1-221ENST00000536378 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■■■■■ 28.4
MLH1-221ENST00000536378 PBRM1Q86U86 1689 aa16.58■□□□□ 0.24
MLH1-221ENST00000536378 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
MLH1-221ENST00000536378 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
MLH1-221ENST00000536378 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
MLH1-221ENST00000536378 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
MLH1-221ENST00000536378 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
MLH1-221ENST00000536378 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
MLH1-221ENST00000536378 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
MLH1-221ENST00000536378 SNAPC4Q5SXM2 1469 aa16.48■□□□□ 0.23
MLH1-221ENST00000536378 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
MLH1-221ENST00000536378 ADAMTS12P58397 1594 aa16.45■□□□□ 0.22
MLH1-221ENST00000536378 CHD1O14646 1710 aa16.44■□□□□ 0.22
MLH1-221ENST00000536378 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
MLH1-221ENST00000536378 CUL7Q14999 1698 aa16.42■□□□□ 0.22
MLH1-221ENST00000536378 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
MLH1-221ENST00000536378 IGF1RP08069 1367 aa16.4■□□□□ 0.22
MLH1-221ENST00000536378 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
MLH1-221ENST00000536378 HRCP23327 699 aa16.36■□□□□ 0.21
MLH1-221ENST00000536378 EEA1Q15075 1411 aa16.36■□□□□ 0.21
MLH1-221ENST00000536378 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
MLH1-221ENST00000536378 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
MLH1-221ENST00000536378 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
MLH1-221ENST00000536378 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
MLH1-221ENST00000536378 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
MLH1-221ENST00000536378 DNAJC5Q9H3Z4 198 aa16.3■□□□□ 0.2
MLH1-221ENST00000536378 NUP160Q12769 1436 aa16.3■□□□□ 0.2
MLH1-221ENST00000536378 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
MLH1-221ENST00000536378 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
MLH1-221ENST00000536378 PRXQ9BXM0 1461 aa16.26■□□□□ 0.19
MLH1-221ENST00000536378 FBLN2P98095 1184 aa16.25■□□□□ 0.19
MLH1-221ENST00000536378 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
MLH1-221ENST00000536378 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
MLH1-221ENST00000536378 SHROOM2Q13796 1616 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms