RNA–Protein interactions for RNA: ENST00000616768.4

MLH1-223, Transcript of mutL homolog 1, humanhuman

TSL 2

Gene MLH1, Length 721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH1-223ENST00000616768 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
MLH1-223ENST00000616768 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
MLH1-223ENST00000616768 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
MLH1-223ENST00000616768 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
MLH1-223ENST00000616768 FOXD1Q16676 465 aa19.23■□□□□ 0.67
MLH1-223ENST00000616768 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
MLH1-223ENST00000616768 PPP6R1Q9UPN7 881 aa18.27■□□□□ 0.52
MLH1-223ENST00000616768 ADRA2BP18089 450 aa18.2■□□□□ 0.5
MLH1-223ENST00000616768 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
MLH1-223ENST00000616768 MSH5O43196 834 aa17.92■□□□□ 0.46
MLH1-223ENST00000616768 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
MLH1-223ENST00000616768 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
MLH1-223ENST00000616768 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
MLH1-223ENST00000616768 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
MLH1-223ENST00000616768 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
MLH1-223ENST00000616768 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
MLH1-223ENST00000616768 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
MLH1-223ENST00000616768 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
MLH1-223ENST00000616768 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
MLH1-223ENST00000616768 KCNA4P22459 653 aa15.94■□□□□ 0.14
MLH1-223ENST00000616768 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
MLH1-223ENST00000616768 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
MLH1-223ENST00000616768 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
MLH1-223ENST00000616768 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
MLH1-223ENST00000616768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.031e-8■■□□□ 11.4
MLH1-223ENST00000616768 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
MLH1-223ENST00000616768 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
MLH1-223ENST00000616768 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
MLH1-223ENST00000616768 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
MLH1-223ENST00000616768 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
MLH1-223ENST00000616768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
MLH1-223ENST00000616768 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
MLH1-223ENST00000616768 FOXD4L1Q9NU39 408 aa14.81□□□□□ -0.04
MLH1-223ENST00000616768 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
MLH1-223ENST00000616768 APLP2Q06481 763 aa14.72□□□□□ -0.05
MLH1-223ENST00000616768 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
MLH1-223ENST00000616768 ZBTB22O15209 634 aa14.66□□□□□ -0.06
MLH1-223ENST00000616768 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
MLH1-223ENST00000616768 CAPN15O75808 1086 aa14.54□□□□□ -0.08
MLH1-223ENST00000616768 ZNF219Q9P2Y4 722 aaPredicted RBP14.51□□□□□ -0.09
MLH1-223ENST00000616768 DSG3P32926 999 aa14.45□□□□□ -0.1
MLH1-223ENST00000616768 ATXN8OSP0DMR3 200 aa14.42□□□□□ -0.1
MLH1-223ENST00000616768 TRHP20396 242 aaPredicted RBP14.39□□□□□ -0.11
MLH1-223ENST00000616768 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
MLH1-223ENST00000616768 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
MLH1-223ENST00000616768 ATF5Q9Y2D1 282 aaPredicted RBP14.29□□□□□ -0.12
MLH1-223ENST00000616768 ABCB7O75027 752 aa14.19□□□□□ -0.14
MLH1-223ENST00000616768 POLA2Q14181 598 aa14.16□□□□□ -0.14
MLH1-223ENST00000616768 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
MLH1-223ENST00000616768 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
MLH1-223ENST00000616768 FBLN2P98095 1184 aa13.77□□□□□ -0.21
MLH1-223ENST00000616768 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
MLH1-223ENST00000616768 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
MLH1-223ENST00000616768 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
MLH1-223ENST00000616768 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
MLH1-223ENST00000616768 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
MLH1-223ENST00000616768 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
MLH1-223ENST00000616768 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
MLH1-223ENST00000616768 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
MLH1-223ENST00000616768 REM2Q8IYK8 340 aaPredicted RBP13.41□□□□□ -0.26
MLH1-223ENST00000616768 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
MLH1-223ENST00000616768 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
MLH1-223ENST00000616768 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
MLH1-223ENST00000616768 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
MLH1-223ENST00000616768 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
MLH1-223ENST00000616768 POTEHQ6S545 545 aa13.18□□□□□ -0.3
MLH1-223ENST00000616768 PROM2Q8N271 834 aa13.13□□□□□ -0.31
MLH1-223ENST00000616768 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.31
MLH1-223ENST00000616768 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
MLH1-223ENST00000616768 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
MLH1-223ENST00000616768 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
MLH1-223ENST00000616768 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
MLH1-223ENST00000616768 FKBP8Q14318 412 aa12.96□□□□□ -0.33
MLH1-223ENST00000616768 ABCC9O60706 1549 aa12.88□□□□□ -0.35
MLH1-223ENST00000616768 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
MLH1-223ENST00000616768 NISCHQ9Y2I1 1504 aa12.87□□□□□ -0.35
MLH1-223ENST00000616768 CREBZFQ9NS37 354 aa12.77□□□□□ -0.37
MLH1-223ENST00000616768 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
MLH1-223ENST00000616768 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
MLH1-223ENST00000616768 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
MLH1-223ENST00000616768 C19orf67A6NJJ6 358 aa12.66□□□□□ -0.38
MLH1-223ENST00000616768 HAX1O00165 279 aa12.66□□□□□ -0.38
MLH1-223ENST00000616768 MNX1P50219 401 aaPredicted RBP12.64□□□□□ -0.39
MLH1-223ENST00000616768 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
MLH1-223ENST00000616768 NPM1P06748 294 aaKnown RBP eCLIP12.58□□□□□ -0.4
MLH1-223ENST00000616768 MIER1Q8N108 512 aa12.57□□□□□ -0.4
MLH1-223ENST00000616768 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
MLH1-223ENST00000616768 EVX2Q03828 476 aa12.53□□□□□ -0.4
MLH1-223ENST00000616768 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
MLH1-223ENST00000616768 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
MLH1-223ENST00000616768 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
MLH1-223ENST00000616768 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
MLH1-223ENST00000616768 CLCN6P51797 869 aa12.46□□□□□ -0.41
MLH1-223ENST00000616768 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
MLH1-223ENST00000616768 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
MLH1-223ENST00000616768 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
MLH1-223ENST00000616768 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
MLH1-223ENST00000616768 NUBP1P53384 320 aa12.35□□□□□ -0.43
MLH1-223ENST00000616768 GABBR2O75899 941 aa12.32□□□□□ -0.44
MLH1-223ENST00000616768 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms