RNA–Protein interactions for RNA: ENST00000491499.1

SLC25A40-207, Transcript of solute carrier family 25 member 40, humanhuman

TSL 3

Gene SLC25A40, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A40-207ENST00000491499 NISCHQ9Y2I1 1504 aa26.75■■□□□ 1.87
SLC25A40-207ENST00000491499 CCDC180Q9P1Z9 1646 aa23.52■■□□□ 1.36
SLC25A40-207ENST00000491499 ABCC9O60706 1549 aa22.69■■□□□ 1.22
SLC25A40-207ENST00000491499 ZCCHC6Q5VYS8 1495 aaKnown RBP22.36■■□□□ 1.17
SLC25A40-207ENST00000491499 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
SLC25A40-207ENST00000491499 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
SLC25A40-207ENST00000491499 MYO15BQ96JP2 1530 aa22.13■■□□□ 1.13
SLC25A40-207ENST00000491499 NACADO15069 1562 aa22.1■■□□□ 1.13
SLC25A40-207ENST00000491499 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
SLC25A40-207ENST00000491499 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
SLC25A40-207ENST00000491499 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
SLC25A40-207ENST00000491499 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
SLC25A40-207ENST00000491499 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
SLC25A40-207ENST00000491499 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
SLC25A40-207ENST00000491499 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
SLC25A40-207ENST00000491499 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
SLC25A40-207ENST00000491499 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
SLC25A40-207ENST00000491499 SMARCA4P51532 1647 aa20.62■□□□□ 0.89
SLC25A40-207ENST00000491499 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
SLC25A40-207ENST00000491499 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
SLC25A40-207ENST00000491499 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
SLC25A40-207ENST00000491499 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
SLC25A40-207ENST00000491499 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
SLC25A40-207ENST00000491499 DNAJC5BQ9UF47 199 aa20.44■□□□□ 0.86
SLC25A40-207ENST00000491499 PEG3Q9GZU2 1588 aa20.43■□□□□ 0.86
SLC25A40-207ENST00000491499 SUPT5HO00267 1087 aaKnown RBP20.42■□□□□ 0.86
SLC25A40-207ENST00000491499 NCAPD3P42695 1498 aa20.42■□□□□ 0.86
SLC25A40-207ENST00000491499 WIZO95785 1651 aa20.35■□□□□ 0.85
SLC25A40-207ENST00000491499 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.85
SLC25A40-207ENST00000491499 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
SLC25A40-207ENST00000491499 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
SLC25A40-207ENST00000491499 AEBP2Q6ZN18 517 aaPredicted RBP20.13■□□□□ 0.81
SLC25A40-207ENST00000491499 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
SLC25A40-207ENST00000491499 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
SLC25A40-207ENST00000491499 CFTRP13569 1480 aa19.8■□□□□ 0.76
SLC25A40-207ENST00000491499 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
SLC25A40-207ENST00000491499 NESP48681 1621 aa19.72■□□□□ 0.75
SLC25A40-207ENST00000491499 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
SLC25A40-207ENST00000491499 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
SLC25A40-207ENST00000491499 ERCC6Q03468 1493 aa19.58■□□□□ 0.72
SLC25A40-207ENST00000491499 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
SLC25A40-207ENST00000491499 PRDM2Q13029 1718 aa19.5■□□□□ 0.71
SLC25A40-207ENST00000491499 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
SLC25A40-207ENST00000491499 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
SLC25A40-207ENST00000491499 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
SLC25A40-207ENST00000491499 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
SLC25A40-207ENST00000491499 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
SLC25A40-207ENST00000491499 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
SLC25A40-207ENST00000491499 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
SLC25A40-207ENST00000491499 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
SLC25A40-207ENST00000491499 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
SLC25A40-207ENST00000491499 WDR62O43379 1518 aa19.3■□□□□ 0.68
SLC25A40-207ENST00000491499 CUX1P39880 1505 aa19.3■□□□□ 0.68
SLC25A40-207ENST00000491499 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
SLC25A40-207ENST00000491499 TOP2BQ02880 1626 aa19.24■□□□□ 0.67
SLC25A40-207ENST00000491499 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
SLC25A40-207ENST00000491499 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
SLC25A40-207ENST00000491499 CUX2O14529 1486 aa19.2■□□□□ 0.66
SLC25A40-207ENST00000491499 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
SLC25A40-207ENST00000491499 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
SLC25A40-207ENST00000491499 SOGA1O94964 1423 aa19.17■□□□□ 0.66
SLC25A40-207ENST00000491499 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
SLC25A40-207ENST00000491499 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
SLC25A40-207ENST00000491499 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
SLC25A40-207ENST00000491499 TARBP1Q13395 1621 aaKnown RBP19■□□□□ 0.63
SLC25A40-207ENST00000491499 KIF27Q86VH2 1401 aa19■□□□□ 0.63
SLC25A40-207ENST00000491499 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
SLC25A40-207ENST00000491499 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
SLC25A40-207ENST00000491499 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
SLC25A40-207ENST00000491499 EEA1Q15075 1411 aa18.93■□□□□ 0.62
SLC25A40-207ENST00000491499 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.62
SLC25A40-207ENST00000491499 GAPVD1Q14C86 1478 aa18.93■□□□□ 0.62
SLC25A40-207ENST00000491499 GRIN2BQ13224 1484 aa18.88■□□□□ 0.61
SLC25A40-207ENST00000491499 ABCA5Q8WWZ7 1642 aa18.85■□□□□ 0.61
SLC25A40-207ENST00000491499 EIF4G3O43432 1585 aaKnown RBP18.85■□□□□ 0.61
SLC25A40-207ENST00000491499 IGF1RP08069 1367 aa18.85■□□□□ 0.61
SLC25A40-207ENST00000491499 FAM9AQ8IZU1 332 aaPredicted RBP18.85■□□□□ 0.61
SLC25A40-207ENST00000491499 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
SLC25A40-207ENST00000491499 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
SLC25A40-207ENST00000491499 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
SLC25A40-207ENST00000491499 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
SLC25A40-207ENST00000491499 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.6
SLC25A40-207ENST00000491499 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
SLC25A40-207ENST00000491499 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
SLC25A40-207ENST00000491499 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
SLC25A40-207ENST00000491499 PBRM1Q86U86 1689 aa18.72■□□□□ 0.59
SLC25A40-207ENST00000491499 FBLN2P98095 1184 aa18.7■□□□□ 0.58
SLC25A40-207ENST00000491499 SYNJ2O15056 1496 aa18.7■□□□□ 0.58
SLC25A40-207ENST00000491499 PRXQ9BXM0 1461 aa18.7■□□□□ 0.58
SLC25A40-207ENST00000491499 CUL7Q14999 1698 aa18.69■□□□□ 0.58
SLC25A40-207ENST00000491499 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
SLC25A40-207ENST00000491499 ADAMTS12P58397 1594 aa18.66■□□□□ 0.58
SLC25A40-207ENST00000491499 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
SLC25A40-207ENST00000491499 KIF21BO75037 1637 aa18.59■□□□□ 0.57
SLC25A40-207ENST00000491499 GOLGA3Q08378 1498 aa18.58■□□□□ 0.57
SLC25A40-207ENST00000491499 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
SLC25A40-207ENST00000491499 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
SLC25A40-207ENST00000491499 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
SLC25A40-207ENST00000491499 NUP160Q12769 1436 aa18.51■□□□□ 0.55
SLC25A40-207ENST00000491499 LOC105371045A0A1W2PR82 267 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms