Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.47■■□□□ 1.99
PTCH2Q9Y6C5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.47■■□□□ 1.99
PTCH2Q9Y6C5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PTCH2Q9Y6C5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PTCH2Q9Y6C5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.47■■□□□ 1.99
PTCH2Q9Y6C5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
PTCH2Q9Y6C5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.46■■□□□ 1.99
PTCH2Q9Y6C5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.46■■□□□ 1.99
PTCH2Q9Y6C5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PTCH2Q9Y6C5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PTCH2Q9Y6C5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.44■■□□□ 1.98
PTCH2Q9Y6C5 AC142381.2-201ENST00000566120 298 ntBASIC27.44■■□□□ 1.98
PTCH2Q9Y6C5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.44■■□□□ 1.98
PTCH2Q9Y6C5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PTCH2Q9Y6C5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PTCH2Q9Y6C5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
PTCH2Q9Y6C5 AC135279.3-201ENST00000610945 1311 ntBASIC27.42■■□□□ 1.98
PTCH2Q9Y6C5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
PTCH2Q9Y6C5 AC106739.1-201ENST00000617035 715 ntBASIC27.42■■□□□ 1.98
PTCH2Q9Y6C5 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 PBX2P1-201ENST00000493219 1291 ntBASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 MIR5787-201ENST00000611784 55 ntBASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PTCH2Q9Y6C5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.4■■□□□ 1.98
PTCH2Q9Y6C5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.4■■□□□ 1.98
PTCH2Q9Y6C5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC27.4■■□□□ 1.98
PTCH2Q9Y6C5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.4■■□□□ 1.98
PTCH2Q9Y6C5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
PTCH2Q9Y6C5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PTCH2Q9Y6C5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.39■■□□□ 1.98
PTCH2Q9Y6C5 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.39■■□□□ 1.98
PTCH2Q9Y6C5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PTCH2Q9Y6C5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.38■■□□□ 1.97
PTCH2Q9Y6C5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PTCH2Q9Y6C5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PTCH2Q9Y6C5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PTCH2Q9Y6C5 ABCB10P1-201ENST00000614297 2181 ntBASIC27.37■■□□□ 1.97
PTCH2Q9Y6C5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.36■■□□□ 1.97
PTCH2Q9Y6C5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.36■■□□□ 1.97
PTCH2Q9Y6C5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
PTCH2Q9Y6C5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.36■■□□□ 1.97
PTCH2Q9Y6C5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.36■■□□□ 1.97
PTCH2Q9Y6C5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
PTCH2Q9Y6C5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.35■■□□□ 1.97
PTCH2Q9Y6C5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
PTCH2Q9Y6C5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCH2Q9Y6C5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
PTCH2Q9Y6C5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PTCH2Q9Y6C5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PTCH2Q9Y6C5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PTCH2Q9Y6C5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PTCH2Q9Y6C5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.33■■□□□ 1.97
PTCH2Q9Y6C5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
PTCH2Q9Y6C5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
PTCH2Q9Y6C5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC27.33■■□□□ 1.97
PTCH2Q9Y6C5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.33■■□□□ 1.97
PTCH2Q9Y6C5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.33■■□□□ 1.97
PTCH2Q9Y6C5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
PTCH2Q9Y6C5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PTCH2Q9Y6C5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
PTCH2Q9Y6C5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.32■■□□□ 1.96
PTCH2Q9Y6C5 AL031432.3-201ENST00000607698 485 ntBASIC27.32■■□□□ 1.96
PTCH2Q9Y6C5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC27.32■■□□□ 1.96
PTCH2Q9Y6C5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.32■■□□□ 1.96
PTCH2Q9Y6C5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.31■■□□□ 1.96
PTCH2Q9Y6C5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PTCH2Q9Y6C5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PTCH2Q9Y6C5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC27.31■■□□□ 1.96
PTCH2Q9Y6C5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC27.31■■□□□ 1.96
PTCH2Q9Y6C5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.31■■□□□ 1.96
PTCH2Q9Y6C5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.31■■□□□ 1.96
PTCH2Q9Y6C5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
PTCH2Q9Y6C5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PTCH2Q9Y6C5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.3■■□□□ 1.96
PTCH2Q9Y6C5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC27.3■■□□□ 1.96
PTCH2Q9Y6C5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PTCH2Q9Y6C5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
PTCH2Q9Y6C5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PTCH2Q9Y6C5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
PTCH2Q9Y6C5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PTCH2Q9Y6C5 SUDS3P1-201ENST00000505831 966 ntBASIC27.29■■□□□ 1.96
PTCH2Q9Y6C5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PTCH2Q9Y6C5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PTCH2Q9Y6C5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PTCH2Q9Y6C5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PTCH2Q9Y6C5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.29■■□□□ 1.96
PTCH2Q9Y6C5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
PTCH2Q9Y6C5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.28■■□□□ 1.96
PTCH2Q9Y6C5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCH2Q9Y6C5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCH2Q9Y6C5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.28■■□□□ 1.96
PTCH2Q9Y6C5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PTCH2Q9Y6C5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.28■■□□□ 1.96
PTCH2Q9Y6C5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms