Protein–RNA interactions for Protein: Q9HBV2

SPACA1, Sperm acrosome membrane-associated protein 1, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPACA1Q9HBV2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPACA1Q9HBV2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 MIR3960-201ENST00000583311 91 ntBASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPACA1Q9HBV2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPACA1Q9HBV2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPACA1Q9HBV2 AC097639.1-201ENST00000565519 1891 ntBASIC20.16■□□□□ 0.82
SPACA1Q9HBV2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPACA1Q9HBV2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPACA1Q9HBV2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SPACA1Q9HBV2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.16■□□□□ 0.82
SPACA1Q9HBV2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPACA1Q9HBV2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPACA1Q9HBV2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPACA1Q9HBV2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPACA1Q9HBV2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.15■□□□□ 0.82
SPACA1Q9HBV2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPACA1Q9HBV2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPACA1Q9HBV2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPACA1Q9HBV2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.14■□□□□ 0.81
SPACA1Q9HBV2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPACA1Q9HBV2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPACA1Q9HBV2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPACA1Q9HBV2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPACA1Q9HBV2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.14■□□□□ 0.81
SPACA1Q9HBV2 AC025884.2-201ENST00000553429 711 ntBASIC20.14■□□□□ 0.81
SPACA1Q9HBV2 MIR7108-201ENST00000614319 87 ntBASIC20.14■□□□□ 0.81
SPACA1Q9HBV2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPACA1Q9HBV2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 AL157400.5-201ENST00000507624 621 ntBASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 AC060814.1-201ENST00000554326 538 ntBASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPACA1Q9HBV2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPACA1Q9HBV2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.12■□□□□ 0.81
SPACA1Q9HBV2 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.12■□□□□ 0.81
SPACA1Q9HBV2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPACA1Q9HBV2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPACA1Q9HBV2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPACA1Q9HBV2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPACA1Q9HBV2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.11■□□□□ 0.81
SPACA1Q9HBV2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.11■□□□□ 0.81
SPACA1Q9HBV2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPACA1Q9HBV2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPACA1Q9HBV2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 MIR639-201ENST00000384974 98 ntBASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 SMPD5-203ENST00000639008 1464 ntBASIC20.1■□□□□ 0.81
SPACA1Q9HBV2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPACA1Q9HBV2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPACA1Q9HBV2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPACA1Q9HBV2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPACA1Q9HBV2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SPACA1Q9HBV2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPACA1Q9HBV2 AC138932.3-201ENST00000567634 1902 ntBASIC20.09■□□□□ 0.81
SPACA1Q9HBV2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPACA1Q9HBV2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.08■□□□□ 0.81
SPACA1Q9HBV2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPACA1Q9HBV2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SPACA1Q9HBV2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.08■□□□□ 0.81
SPACA1Q9HBV2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPACA1Q9HBV2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPACA1Q9HBV2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPACA1Q9HBV2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.08■□□□□ 0.8
SPACA1Q9HBV2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPACA1Q9HBV2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms