Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCGF1Q9BSM1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCGF1Q9BSM1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCGF1Q9BSM1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.88■□□□□ 0.77
PCGF1Q9BSM1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
PCGF1Q9BSM1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.87■□□□□ 0.77
PCGF1Q9BSM1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.87■□□□□ 0.77
PCGF1Q9BSM1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
PCGF1Q9BSM1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.87■□□□□ 0.77
PCGF1Q9BSM1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCGF1Q9BSM1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCGF1Q9BSM1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF1Q9BSM1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.86■□□□□ 0.77
PCGF1Q9BSM1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF1Q9BSM1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF1Q9BSM1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF1Q9BSM1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF1Q9BSM1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF1Q9BSM1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF1Q9BSM1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF1Q9BSM1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.85■□□□□ 0.77
PCGF1Q9BSM1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF1Q9BSM1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF1Q9BSM1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.84■□□□□ 0.77
PCGF1Q9BSM1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCGF1Q9BSM1 AC010980.1-201ENST00000587192 1142 ntBASIC19.84■□□□□ 0.77
PCGF1Q9BSM1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.84■□□□□ 0.77
PCGF1Q9BSM1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCGF1Q9BSM1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCGF1Q9BSM1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCGF1Q9BSM1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCGF1Q9BSM1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
PCGF1Q9BSM1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PCGF1Q9BSM1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.83■□□□□ 0.77
PCGF1Q9BSM1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.83■□□□□ 0.77
PCGF1Q9BSM1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PCGF1Q9BSM1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.83■□□□□ 0.76
PCGF1Q9BSM1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCGF1Q9BSM1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCGF1Q9BSM1 AC091060.1-201ENST00000623524 1766 ntBASIC19.83■□□□□ 0.76
PCGF1Q9BSM1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCGF1Q9BSM1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF1Q9BSM1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF1Q9BSM1 RARRES2P1-201ENST00000474487 481 ntBASIC19.82■□□□□ 0.76
PCGF1Q9BSM1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.82■□□□□ 0.76
PCGF1Q9BSM1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF1Q9BSM1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF1Q9BSM1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 AC145676.1-201ENST00000514988 2004 ntBASIC19.81■□□□□ 0.76
PCGF1Q9BSM1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCGF1Q9BSM1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PCGF1Q9BSM1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.8■□□□□ 0.76
PCGF1Q9BSM1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCGF1Q9BSM1 AC074183.2-201ENST00000623112 922 ntBASIC19.8■□□□□ 0.76
PCGF1Q9BSM1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCGF1Q9BSM1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 KRT8P33-201ENST00000508125 1423 ntBASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 AC092803.2-201ENST00000564287 1899 ntBASIC19.79■□□□□ 0.76
PCGF1Q9BSM1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF1Q9BSM1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.77■□□□□ 0.76
PCGF1Q9BSM1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCGF1Q9BSM1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.77■□□□□ 0.76
PCGF1Q9BSM1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCGF1Q9BSM1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.76■□□□□ 0.75
PCGF1Q9BSM1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.76■□□□□ 0.75
PCGF1Q9BSM1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCGF1Q9BSM1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCGF1Q9BSM1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.76■□□□□ 0.75
PCGF1Q9BSM1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms