Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.74■■■□□ 2.35
CRAMP1Q96RY5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.74■■■□□ 2.35
CRAMP1Q96RY5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.74■■■□□ 2.35
CRAMP1Q96RY5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CRAMP1Q96RY5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CRAMP1Q96RY5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.73■■■□□ 2.35
CRAMP1Q96RY5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
CRAMP1Q96RY5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
CRAMP1Q96RY5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.72■■■□□ 2.35
CRAMP1Q96RY5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CRAMP1Q96RY5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CRAMP1Q96RY5 MIR935-201ENST00000401179 91 ntBASIC29.72■■■□□ 2.35
CRAMP1Q96RY5 MIR4281-201ENST00000580852 62 ntBASIC29.72■■■□□ 2.35
CRAMP1Q96RY5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CRAMP1Q96RY5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CRAMP1Q96RY5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.71■■■□□ 2.35
CRAMP1Q96RY5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.71■■■□□ 2.35
CRAMP1Q96RY5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CRAMP1Q96RY5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.7■■■□□ 2.35
CRAMP1Q96RY5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CRAMP1Q96RY5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CRAMP1Q96RY5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CRAMP1Q96RY5 MIR638-201ENST00000385237 100 ntBASIC29.69■■■□□ 2.34
CRAMP1Q96RY5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.69■■■□□ 2.34
CRAMP1Q96RY5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CRAMP1Q96RY5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CRAMP1Q96RY5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.68■■■□□ 2.34
CRAMP1Q96RY5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CRAMP1Q96RY5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
CRAMP1Q96RY5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
CRAMP1Q96RY5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.67■■■□□ 2.34
CRAMP1Q96RY5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.67■■■□□ 2.34
CRAMP1Q96RY5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CRAMP1Q96RY5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 AC131281.2-201ENST00000520478 145 ntBASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
CRAMP1Q96RY5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CRAMP1Q96RY5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.65■■■□□ 2.34
CRAMP1Q96RY5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.65■■■□□ 2.34
CRAMP1Q96RY5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
CRAMP1Q96RY5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.65■■■□□ 2.34
CRAMP1Q96RY5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CRAMP1Q96RY5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.64■■■□□ 2.34
CRAMP1Q96RY5 AC139426.1-201ENST00000568218 2529 ntBASIC29.64■■■□□ 2.34
CRAMP1Q96RY5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CRAMP1Q96RY5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CRAMP1Q96RY5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CRAMP1Q96RY5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.63■■■□□ 2.33
CRAMP1Q96RY5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.63■■■□□ 2.33
CRAMP1Q96RY5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.63■■■□□ 2.33
CRAMP1Q96RY5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.63■■■□□ 2.33
CRAMP1Q96RY5 AL139246.5-201ENST00000606645 996 ntBASIC29.63■■■□□ 2.33
CRAMP1Q96RY5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CRAMP1Q96RY5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CRAMP1Q96RY5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.62■■■□□ 2.33
CRAMP1Q96RY5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.62■■■□□ 2.33
CRAMP1Q96RY5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.62■■■□□ 2.33
CRAMP1Q96RY5 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.62■■■□□ 2.33
CRAMP1Q96RY5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
CRAMP1Q96RY5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
CRAMP1Q96RY5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
CRAMP1Q96RY5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
CRAMP1Q96RY5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.61■■■□□ 2.33
CRAMP1Q96RY5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CRAMP1Q96RY5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
CRAMP1Q96RY5 AP004609.3-201ENST00000610705 1884 ntBASIC29.6■■■□□ 2.33
CRAMP1Q96RY5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CRAMP1Q96RY5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.6■■■□□ 2.33
CRAMP1Q96RY5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.6■■■□□ 2.33
CRAMP1Q96RY5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.6■■■□□ 2.33
CRAMP1Q96RY5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CRAMP1Q96RY5 AC010997.5-201ENST00000609182 354 ntBASIC29.59■■■□□ 2.33
CRAMP1Q96RY5 AL117332.1-201ENST00000622628 974 ntBASIC29.59■■■□□ 2.33
CRAMP1Q96RY5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CRAMP1Q96RY5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
CRAMP1Q96RY5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
CRAMP1Q96RY5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.58■■■□□ 2.33
CRAMP1Q96RY5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.58■■■□□ 2.33
CRAMP1Q96RY5 MIR3621-201ENST00000580529 85 ntBASIC29.58■■■□□ 2.33
CRAMP1Q96RY5 AC011551.1-201ENST00000614101 683 ntBASIC29.58■■■□□ 2.33
CRAMP1Q96RY5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
CRAMP1Q96RY5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
CRAMP1Q96RY5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.57■■■□□ 2.32
CRAMP1Q96RY5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CRAMP1Q96RY5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.57■■■□□ 2.32
CRAMP1Q96RY5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CRAMP1Q96RY5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.57■■■□□ 2.32
CRAMP1Q96RY5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
CRAMP1Q96RY5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.56■■■□□ 2.32
CRAMP1Q96RY5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CRAMP1Q96RY5 MIR6724-1-201ENST00000616420 92 ntBASIC29.56■■■□□ 2.32
CRAMP1Q96RY5 MIR6724-2-201ENST00000616483 92 ntBASIC29.56■■■□□ 2.32
CRAMP1Q96RY5 MIR6724-4-201ENST00000617390 92 ntBASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms