Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 LINC01124-201ENST00000409786 2117 ntBASIC19.84■□□□□ 0.77
SCARB1Q8WTV0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCARB1Q8WTV0 AL024507.2-201ENST00000606070 2574 ntBASIC19.84■□□□□ 0.77
SCARB1Q8WTV0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.84■□□□□ 0.77
SCARB1Q8WTV0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCARB1Q8WTV0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCARB1Q8WTV0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCARB1Q8WTV0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SCARB1Q8WTV0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.83■□□□□ 0.77
SCARB1Q8WTV0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SCARB1Q8WTV0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.83■□□□□ 0.76
SCARB1Q8WTV0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.83■□□□□ 0.76
SCARB1Q8WTV0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCARB1Q8WTV0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.83■□□□□ 0.76
SCARB1Q8WTV0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCARB1Q8WTV0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SCARB1Q8WTV0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCARB1Q8WTV0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCARB1Q8WTV0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SCARB1Q8WTV0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCARB1Q8WTV0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCARB1Q8WTV0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCARB1Q8WTV0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.8■□□□□ 0.76
SCARB1Q8WTV0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SCARB1Q8WTV0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCARB1Q8WTV0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.79■□□□□ 0.76
SCARB1Q8WTV0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCARB1Q8WTV0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.79■□□□□ 0.76
SCARB1Q8WTV0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.79■□□□□ 0.76
SCARB1Q8WTV0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.79■□□□□ 0.76
SCARB1Q8WTV0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SCARB1Q8WTV0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCARB1Q8WTV0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCARB1Q8WTV0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.78■□□□□ 0.76
SCARB1Q8WTV0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCARB1Q8WTV0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCARB1Q8WTV0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SCARB1Q8WTV0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.78■□□□□ 0.76
SCARB1Q8WTV0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCARB1Q8WTV0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCARB1Q8WTV0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCARB1Q8WTV0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.77■□□□□ 0.76
SCARB1Q8WTV0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCARB1Q8WTV0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SCARB1Q8WTV0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCARB1Q8WTV0 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.77■□□□□ 0.76
SCARB1Q8WTV0 AL117328.2-201ENST00000624617 1940 ntBASIC19.77■□□□□ 0.76
SCARB1Q8WTV0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.77■□□□□ 0.76
SCARB1Q8WTV0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.77■□□□□ 0.75
SCARB1Q8WTV0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.77■□□□□ 0.75
SCARB1Q8WTV0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 AC096887.2-201ENST00000623443 1957 ntBASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 AC021231.2-201ENST00000594613 730 ntBASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.76■□□□□ 0.75
SCARB1Q8WTV0 DUX4L29-201ENST00000425409 679 ntBASIC19.75■□□□□ 0.75
SCARB1Q8WTV0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCARB1Q8WTV0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCARB1Q8WTV0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCARB1Q8WTV0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCARB1Q8WTV0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SCARB1Q8WTV0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCARB1Q8WTV0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCARB1Q8WTV0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCARB1Q8WTV0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCARB1Q8WTV0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SCARB1Q8WTV0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCARB1Q8WTV0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCARB1Q8WTV0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms