Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTSSBQ8NFR3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTSSBQ8NFR3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SPTSSBQ8NFR3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPTSSBQ8NFR3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SPTSSBQ8NFR3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
SPTSSBQ8NFR3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPTSSBQ8NFR3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPTSSBQ8NFR3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPTSSBQ8NFR3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPTSSBQ8NFR3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC13.21□□□□□ -0.29
SPTSSBQ8NFR3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
SPTSSBQ8NFR3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SPTSSBQ8NFR3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPTSSBQ8NFR3 AL121603.2-201ENST00000557373 2117 ntBASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 AC020928.2-201ENST00000588717 2197 ntBASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPTSSBQ8NFR3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 DRD5P2-201ENST00000421395 2012 ntBASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SPTSSBQ8NFR3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPTSSBQ8NFR3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSBQ8NFR3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
SPTSSBQ8NFR3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC13.16□□□□□ -0.3
SPTSSBQ8NFR3 AL135925.1-201ENST00000605920 1701 ntBASIC13.16□□□□□ -0.3
SPTSSBQ8NFR3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC13.16□□□□□ -0.3
SPTSSBQ8NFR3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPTSSBQ8NFR3 AL139393.2-201ENST00000608721 2025 ntBASIC13.15□□□□□ -0.3
SPTSSBQ8NFR3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPTSSBQ8NFR3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPTSSBQ8NFR3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.15□□□□□ -0.3
SPTSSBQ8NFR3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPTSSBQ8NFR3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SPTSSBQ8NFR3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPTSSBQ8NFR3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPTSSBQ8NFR3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SPTSSBQ8NFR3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
SPTSSBQ8NFR3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SPTSSBQ8NFR3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SPTSSBQ8NFR3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SPTSSBQ8NFR3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.14□□□□□ -0.31
SPTSSBQ8NFR3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SPTSSBQ8NFR3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms