Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.34■■□□□ 1.17
PSD4Q8NDX1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
PSD4Q8NDX1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PSD4Q8NDX1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PSD4Q8NDX1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PSD4Q8NDX1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PSD4Q8NDX1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PSD4Q8NDX1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.33■■□□□ 1.17
PSD4Q8NDX1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.33■■□□□ 1.17
PSD4Q8NDX1 AC020928.2-201ENST00000588717 2197 ntBASIC22.33■■□□□ 1.16
PSD4Q8NDX1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PSD4Q8NDX1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PSD4Q8NDX1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PSD4Q8NDX1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
PSD4Q8NDX1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PSD4Q8NDX1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.32■■□□□ 1.16
PSD4Q8NDX1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PSD4Q8NDX1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.32■■□□□ 1.16
PSD4Q8NDX1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PSD4Q8NDX1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PSD4Q8NDX1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSD4Q8NDX1 AC142472.1-201ENST00000612013 1741 ntBASIC22.31■■□□□ 1.16
PSD4Q8NDX1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PSD4Q8NDX1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSD4Q8NDX1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSD4Q8NDX1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PSD4Q8NDX1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.31■■□□□ 1.16
PSD4Q8NDX1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSD4Q8NDX1 MIR6765-201ENST00000614092 87 ntBASIC22.31■■□□□ 1.16
PSD4Q8NDX1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
PSD4Q8NDX1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 AC018755.3-202ENST00000596210 929 ntBASIC22.3■■□□□ 1.16
PSD4Q8NDX1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
PSD4Q8NDX1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PSD4Q8NDX1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.29■■□□□ 1.16
PSD4Q8NDX1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PSD4Q8NDX1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.29■■□□□ 1.16
PSD4Q8NDX1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
PSD4Q8NDX1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.29■■□□□ 1.16
PSD4Q8NDX1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
PSD4Q8NDX1 AP004609.3-201ENST00000610705 1884 ntBASIC22.28■■□□□ 1.16
PSD4Q8NDX1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 DUSP8P4-201ENST00000399538 1761 ntBASIC22.28■■□□□ 1.16
PSD4Q8NDX1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.28■■□□□ 1.16
PSD4Q8NDX1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.27■■□□□ 1.16
PSD4Q8NDX1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.27■■□□□ 1.16
PSD4Q8NDX1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PSD4Q8NDX1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PSD4Q8NDX1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PSD4Q8NDX1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PSD4Q8NDX1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.27■■□□□ 1.16
PSD4Q8NDX1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PSD4Q8NDX1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PSD4Q8NDX1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PSD4Q8NDX1 AC092803.2-201ENST00000564287 1899 ntBASIC22.26■■□□□ 1.15
PSD4Q8NDX1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PSD4Q8NDX1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PSD4Q8NDX1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PSD4Q8NDX1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.25■■□□□ 1.15
PSD4Q8NDX1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.25■■□□□ 1.15
PSD4Q8NDX1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PSD4Q8NDX1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PSD4Q8NDX1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PSD4Q8NDX1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
PSD4Q8NDX1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSD4Q8NDX1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PSD4Q8NDX1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.23■■□□□ 1.15
PSD4Q8NDX1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSD4Q8NDX1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
PSD4Q8NDX1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PSD4Q8NDX1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.23■■□□□ 1.15
PSD4Q8NDX1 BHLHE23-202ENST00000612929 1109 ntBASIC22.23■■□□□ 1.15
PSD4Q8NDX1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PSD4Q8NDX1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
PSD4Q8NDX1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PSD4Q8NDX1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PSD4Q8NDX1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PSD4Q8NDX1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.22■■□□□ 1.15
PSD4Q8NDX1 AC093323.1-202ENST00000635031 2045 ntBASIC22.22■■□□□ 1.15
PSD4Q8NDX1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PSD4Q8NDX1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PSD4Q8NDX1 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.21■■□□□ 1.15
PSD4Q8NDX1 AC139795.1-202ENST00000500444 432 ntBASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms