Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.64■□□□□ 0.73
COMMD1Q8N668 AC018358.1-201ENST00000631079 1402 ntBASIC19.64■□□□□ 0.73
COMMD1Q8N668 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
COMMD1Q8N668 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD1Q8N668 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD1Q8N668 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.64■□□□□ 0.73
COMMD1Q8N668 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD1Q8N668 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD1Q8N668 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.63■□□□□ 0.73
COMMD1Q8N668 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.62■□□□□ 0.73
COMMD1Q8N668 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD1Q8N668 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD1Q8N668 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COMMD1Q8N668 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD1Q8N668 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD1Q8N668 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD1Q8N668 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD1Q8N668 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
COMMD1Q8N668 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.61■□□□□ 0.73
COMMD1Q8N668 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD1Q8N668 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.61■□□□□ 0.73
COMMD1Q8N668 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD1Q8N668 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
COMMD1Q8N668 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD1Q8N668 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD1Q8N668 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.6■□□□□ 0.73
COMMD1Q8N668 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COMMD1Q8N668 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD1Q8N668 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD1Q8N668 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD1Q8N668 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD1Q8N668 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD1Q8N668 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD1Q8N668 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
COMMD1Q8N668 RARRES2P2-201ENST00000394842 485 ntBASIC19.59■□□□□ 0.73
COMMD1Q8N668 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD1Q8N668 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.59■□□□□ 0.73
COMMD1Q8N668 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD1Q8N668 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD1Q8N668 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD1Q8N668 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.59■□□□□ 0.73
COMMD1Q8N668 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.58■□□□□ 0.73
COMMD1Q8N668 AC060814.1-201ENST00000554326 538 ntBASIC19.58■□□□□ 0.72
COMMD1Q8N668 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.58■□□□□ 0.72
COMMD1Q8N668 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.58■□□□□ 0.72
COMMD1Q8N668 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.58■□□□□ 0.72
COMMD1Q8N668 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COMMD1Q8N668 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
COMMD1Q8N668 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD1Q8N668 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.57■□□□□ 0.72
COMMD1Q8N668 CLDN5-201ENST00000403084 2357 ntBASIC19.56■□□□□ 0.72
COMMD1Q8N668 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD1Q8N668 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.56■□□□□ 0.72
COMMD1Q8N668 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD1Q8N668 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD1Q8N668 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD1Q8N668 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD1Q8N668 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COMMD1Q8N668 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COMMD1Q8N668 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD1Q8N668 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.55■□□□□ 0.72
COMMD1Q8N668 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD1Q8N668 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD1Q8N668 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.55■□□□□ 0.72
COMMD1Q8N668 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD1Q8N668 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD1Q8N668 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD1Q8N668 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.55■□□□□ 0.72
COMMD1Q8N668 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COMMD1Q8N668 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD1Q8N668 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
COMMD1Q8N668 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.54■□□□□ 0.72
COMMD1Q8N668 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COMMD1Q8N668 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD1Q8N668 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD1Q8N668 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD1Q8N668 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COMMD1Q8N668 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD1Q8N668 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD1Q8N668 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COMMD1Q8N668 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
COMMD1Q8N668 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD1Q8N668 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD1Q8N668 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD1Q8N668 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD1Q8N668 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD1Q8N668 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COMMD1Q8N668 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD1Q8N668 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD1Q8N668 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
COMMD1Q8N668 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms