Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TBC1D28Q2M2D7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D28Q2M2D7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D28Q2M2D7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D28Q2M2D7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.74■□□□□ 0.91
TBC1D28Q2M2D7 ATP5G2P3-201ENST00000429083 425 ntBASIC20.74■□□□□ 0.91
TBC1D28Q2M2D7 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.74■□□□□ 0.91
TBC1D28Q2M2D7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TBC1D28Q2M2D7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 TSPY13P-201ENST00000338964 914 ntBASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 AC004987.1-201ENST00000428627 508 ntBASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 DUX4L18-201ENST00000553347 1267 ntBASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TBC1D28Q2M2D7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
TBC1D28Q2M2D7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.72■□□□□ 0.91
TBC1D28Q2M2D7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TBC1D28Q2M2D7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D28Q2M2D7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TBC1D28Q2M2D7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TBC1D28Q2M2D7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D28Q2M2D7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D28Q2M2D7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D28Q2M2D7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D28Q2M2D7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
TBC1D28Q2M2D7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TBC1D28Q2M2D7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TBC1D28Q2M2D7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.71■□□□□ 0.91
TBC1D28Q2M2D7 AC097639.1-201ENST00000565519 1891 ntBASIC20.71■□□□□ 0.91
TBC1D28Q2M2D7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D28Q2M2D7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.7■□□□□ 0.9
TBC1D28Q2M2D7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D28Q2M2D7 RPS2P7-201ENST00000447334 885 ntBASIC20.7■□□□□ 0.9
TBC1D28Q2M2D7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D28Q2M2D7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D28Q2M2D7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D28Q2M2D7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D28Q2M2D7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D28Q2M2D7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D28Q2M2D7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.69■□□□□ 0.9
TBC1D28Q2M2D7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.69■□□□□ 0.9
TBC1D28Q2M2D7 AC139795.1-202ENST00000500444 432 ntBASIC20.69■□□□□ 0.9
TBC1D28Q2M2D7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D28Q2M2D7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TBC1D28Q2M2D7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D28Q2M2D7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TBC1D28Q2M2D7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D28Q2M2D7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D28Q2M2D7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D28Q2M2D7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
TBC1D28Q2M2D7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D28Q2M2D7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.67■□□□□ 0.9
TBC1D28Q2M2D7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TBC1D28Q2M2D7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TBC1D28Q2M2D7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.67■□□□□ 0.9
TBC1D28Q2M2D7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D28Q2M2D7 AL033527.3-201ENST00000566366 1196 ntBASIC20.67■□□□□ 0.9
TBC1D28Q2M2D7 AC087393.1-201ENST00000582896 145 ntBASIC20.67■□□□□ 0.9
TBC1D28Q2M2D7 BHLHE23-202ENST00000612929 1109 ntBASIC20.67■□□□□ 0.9
TBC1D28Q2M2D7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.67■□□□□ 0.9
TBC1D28Q2M2D7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D28Q2M2D7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D28Q2M2D7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.66■□□□□ 0.9
TBC1D28Q2M2D7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
TBC1D28Q2M2D7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D28Q2M2D7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TBC1D28Q2M2D7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TBC1D28Q2M2D7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D28Q2M2D7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D28Q2M2D7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.65■□□□□ 0.9
TBC1D28Q2M2D7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.65■□□□□ 0.9
TBC1D28Q2M2D7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D28Q2M2D7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D28Q2M2D7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D28Q2M2D7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D28Q2M2D7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D28Q2M2D7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D28Q2M2D7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D28Q2M2D7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D28Q2M2D7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.64■□□□□ 0.89
TBC1D28Q2M2D7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TBC1D28Q2M2D7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.64■□□□□ 0.89
TBC1D28Q2M2D7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
TBC1D28Q2M2D7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.63■□□□□ 0.89
TBC1D28Q2M2D7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D28Q2M2D7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TBC1D28Q2M2D7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D28Q2M2D7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.63■□□□□ 0.89
TBC1D28Q2M2D7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.63■□□□□ 0.89
TBC1D28Q2M2D7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TBC1D28Q2M2D7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms