Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PPP4CP60510 TK2-216ENST00000564917 1156 ntTSL 3 BASIC28.65■■■□□ 2.18
PPP4CP60510 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
PPP4CP60510 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
PPP4CP60510 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
PPP4CP60510 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
PPP4CP60510 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
PPP4CP60510 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PPP4CP60510 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.64■■■□□ 2.18
PPP4CP60510 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.64■■■□□ 2.18
PPP4CP60510 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PPP4CP60510 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.17
PPP4CP60510 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.64■■■□□ 2.17
PPP4CP60510 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
PPP4CP60510 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
PPP4CP60510 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PPP4CP60510 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
PPP4CP60510 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
PPP4CP60510 KRT18P24-201ENST00000344739 1156 ntBASIC28.62■■■□□ 2.17
PPP4CP60510 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PPP4CP60510 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
PPP4CP60510 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.62■■■□□ 2.17
PPP4CP60510 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.61■■■□□ 2.17
PPP4CP60510 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PPP4CP60510 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
PPP4CP60510 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.61■■■□□ 2.17
PPP4CP60510 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.61■■■□□ 2.17
PPP4CP60510 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.61■■■□□ 2.17
PPP4CP60510 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PPP4CP60510 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.6■■■□□ 2.17
PPP4CP60510 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PPP4CP60510 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.6■■■□□ 2.17
PPP4CP60510 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PPP4CP60510 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.6■■■□□ 2.17
PPP4CP60510 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PPP4CP60510 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
PPP4CP60510 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PPP4CP60510 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
PPP4CP60510 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PPP4CP60510 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.59■■■□□ 2.17
PPP4CP60510 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PPP4CP60510 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
PPP4CP60510 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.58■■■□□ 2.17
PPP4CP60510 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.58■■■□□ 2.17
PPP4CP60510 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.58■■■□□ 2.17
PPP4CP60510 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PPP4CP60510 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PPP4CP60510 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PPP4CP60510 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.57■■■□□ 2.16
PPP4CP60510 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PPP4CP60510 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
PPP4CP60510 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.56■■■□□ 2.16
PPP4CP60510 GUSBP5-201ENST00000418136 578 ntBASIC28.56■■■□□ 2.16
PPP4CP60510 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC28.56■■■□□ 2.16
PPP4CP60510 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
PPP4CP60510 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.55■■■□□ 2.16
PPP4CP60510 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
PPP4CP60510 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.54■■■□□ 2.16
PPP4CP60510 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PPP4CP60510 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PPP4CP60510 AL592295.1-201ENST00000400984 884 ntBASIC28.54■■■□□ 2.16
PPP4CP60510 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PPP4CP60510 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.53■■■□□ 2.16
PPP4CP60510 Z92544.1-202ENST00000571933 1220 ntBASIC28.53■■■□□ 2.16
PPP4CP60510 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.53■■■□□ 2.16
PPP4CP60510 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.53■■■□□ 2.16
PPP4CP60510 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.53■■■□□ 2.16
PPP4CP60510 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
PPP4CP60510 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
PPP4CP60510 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.53■■■□□ 2.16
PPP4CP60510 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PPP4CP60510 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PPP4CP60510 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PPP4CP60510 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PPP4CP60510 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
PPP4CP60510 AL121749.1-202ENST00000609313 2153 ntBASIC28.51■■■□□ 2.16
PPP4CP60510 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PPP4CP60510 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PPP4CP60510 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PPP4CP60510 AC120024.1-201ENST00000562672 995 ntBASIC28.51■■■□□ 2.15
PPP4CP60510 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.51■■■□□ 2.15
PPP4CP60510 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PPP4CP60510 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PPP4CP60510 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.51■■■□□ 2.15
PPP4CP60510 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
PPP4CP60510 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
PPP4CP60510 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PPP4CP60510 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
PPP4CP60510 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.5■■■□□ 2.15
PPP4CP60510 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.5■■■□□ 2.15
PPP4CP60510 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.5■■■□□ 2.15
PPP4CP60510 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PPP4CP60510 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPP4CP60510 AC239859.2-201ENST00000444165 318 ntBASIC28.49■■■□□ 2.15
PPP4CP60510 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPP4CP60510 THA1P-201ENST00000590384 1145 ntBASIC28.49■■■□□ 2.15
PPP4CP60510 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPP4CP60510 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PPP4CP60510 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.48■■■□□ 2.15
PPP4CP60510 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms