Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.94■■■□□ 2.38
KCNA3P22001 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
KCNA3P22001 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
KCNA3P22001 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
KCNA3P22001 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
KCNA3P22001 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
KCNA3P22001 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.93■■■□□ 2.38
KCNA3P22001 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
KCNA3P22001 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
KCNA3P22001 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
KCNA3P22001 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
KCNA3P22001 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.91■■■□□ 2.38
KCNA3P22001 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
KCNA3P22001 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
KCNA3P22001 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
KCNA3P22001 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
KCNA3P22001 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.9■■■□□ 2.38
KCNA3P22001 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.9■■■□□ 2.38
KCNA3P22001 MTDHP2-201ENST00000601468 714 ntBASIC29.89■■■□□ 2.38
KCNA3P22001 AC106739.1-201ENST00000617035 715 ntBASIC29.89■■■□□ 2.38
KCNA3P22001 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.89■■■□□ 2.38
KCNA3P22001 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
KCNA3P22001 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
KCNA3P22001 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
KCNA3P22001 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.88■■■□□ 2.37
KCNA3P22001 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
KCNA3P22001 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
KCNA3P22001 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
KCNA3P22001 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.87■■■□□ 2.37
KCNA3P22001 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC29.87■■■□□ 2.37
KCNA3P22001 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
KCNA3P22001 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
KCNA3P22001 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.86■■■□□ 2.37
KCNA3P22001 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.86■■■□□ 2.37
KCNA3P22001 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.86■■■□□ 2.37
KCNA3P22001 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
KCNA3P22001 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
KCNA3P22001 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.85■■■□□ 2.37
KCNA3P22001 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
KCNA3P22001 AL031432.3-201ENST00000607698 485 ntBASIC29.85■■■□□ 2.37
KCNA3P22001 AC135279.3-201ENST00000610945 1311 ntBASIC29.85■■■□□ 2.37
KCNA3P22001 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
KCNA3P22001 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.84■■■□□ 2.37
KCNA3P22001 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
KCNA3P22001 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
KCNA3P22001 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
KCNA3P22001 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
KCNA3P22001 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
KCNA3P22001 PBX2P1-201ENST00000493219 1291 ntBASIC29.83■■■□□ 2.37
KCNA3P22001 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.83■■■□□ 2.37
KCNA3P22001 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
KCNA3P22001 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
KCNA3P22001 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.81■■■□□ 2.36
KCNA3P22001 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
KCNA3P22001 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
KCNA3P22001 SUDS3P1-201ENST00000505831 966 ntBASIC29.81■■■□□ 2.36
KCNA3P22001 AC104564.3-201ENST00000582367 638 ntBASIC29.81■■■□□ 2.36
KCNA3P22001 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
KCNA3P22001 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNA3P22001 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNA3P22001 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNA3P22001 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNA3P22001 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.8■■■□□ 2.36
KCNA3P22001 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
KCNA3P22001 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC29.8■■■□□ 2.36
KCNA3P22001 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC29.8■■■□□ 2.36
KCNA3P22001 AC142381.2-201ENST00000566120 298 ntBASIC29.8■■■□□ 2.36
KCNA3P22001 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
KCNA3P22001 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.79■■■□□ 2.36
KCNA3P22001 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
KCNA3P22001 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
KCNA3P22001 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.79■■■□□ 2.36
KCNA3P22001 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.79■■■□□ 2.36
KCNA3P22001 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.79■■■□□ 2.36
KCNA3P22001 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
KCNA3P22001 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
KCNA3P22001 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
KCNA3P22001 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
KCNA3P22001 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC29.78■■■□□ 2.36
KCNA3P22001 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
KCNA3P22001 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
KCNA3P22001 AL449106.1-201ENST00000608517 1980 ntBASIC29.77■■■□□ 2.36
KCNA3P22001 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
KCNA3P22001 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.76■■■□□ 2.35
KCNA3P22001 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
KCNA3P22001 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC29.76■■■□□ 2.35
KCNA3P22001 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KCNA3P22001 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.75■■■□□ 2.35
KCNA3P22001 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.75■■■□□ 2.35
KCNA3P22001 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KCNA3P22001 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KCNA3P22001 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
KCNA3P22001 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KCNA3P22001 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.74■■■□□ 2.35
KCNA3P22001 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.74■■■□□ 2.35
KCNA3P22001 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC29.74■■■□□ 2.35
KCNA3P22001 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.74■■■□□ 2.35
KCNA3P22001 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC29.74■■■□□ 2.35
KCNA3P22001 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KCNA3P22001 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms