Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TCRBP04435 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.3■□□□□ 0.84
TCRBP04435 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.3■□□□□ 0.84
TCRBP04435 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBP04435 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TCRBP04435 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TCRBP04435 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBP04435 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBP04435 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TCRBP04435 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TCRBP04435 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBP04435 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBP04435 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.29■□□□□ 0.84
TCRBP04435 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBP04435 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBP04435 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.28■□□□□ 0.84
TCRBP04435 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBP04435 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
TCRBP04435 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBP04435 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBP04435 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TCRBP04435 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBP04435 C9orf163-202ENST00000624034 2573 ntBASIC20.27■□□□□ 0.84
TCRBP04435 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBP04435 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBP04435 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBP04435 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBP04435 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TCRBP04435 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TCRBP04435 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBP04435 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.26■□□□□ 0.83
TCRBP04435 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBP04435 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBP04435 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TCRBP04435 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBP04435 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBP04435 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBP04435 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBP04435 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.25■□□□□ 0.83
TCRBP04435 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBP04435 AL117328.2-201ENST00000624617 1940 ntBASIC20.25■□□□□ 0.83
TCRBP04435 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBP04435 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBP04435 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBP04435 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBP04435 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBP04435 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBP04435 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.22■□□□□ 0.83
TCRBP04435 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.22■□□□□ 0.83
TCRBP04435 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBP04435 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.22■□□□□ 0.83
TCRBP04435 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.22■□□□□ 0.83
TCRBP04435 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBP04435 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.22■□□□□ 0.83
TCRBP04435 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBP04435 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBP04435 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBP04435 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBP04435 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TCRBP04435 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBP04435 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBP04435 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBP04435 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TCRBP04435 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.2■□□□□ 0.82
TCRBP04435 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBP04435 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBP04435 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
TCRBP04435 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
TCRBP04435 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBP04435 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBP04435 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.2■□□□□ 0.82
TCRBP04435 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TCRBP04435 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBP04435 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBP04435 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBP04435 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TCRBP04435 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBP04435 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TCRBP04435 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TCRBP04435 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.18■□□□□ 0.82
TCRBP04435 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TCRBP04435 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBP04435 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.18■□□□□ 0.82
TCRBP04435 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBP04435 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBP04435 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.18■□□□□ 0.82
TCRBP04435 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.18■□□□□ 0.82
TCRBP04435 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.18■□□□□ 0.82
TCRBP04435 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TCRBP04435 AC004812.2-201ENST00000611079 2094 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms