Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCAF4O95104 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCAF4O95104 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCAF4O95104 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCAF4O95104 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.34■□□□□ 0.69
SCAF4O95104 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCAF4O95104 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCAF4O95104 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCAF4O95104 LINC00543-201ENST00000567234 1845 ntBASIC19.34■□□□□ 0.69
SCAF4O95104 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.34■□□□□ 0.69
SCAF4O95104 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCAF4O95104 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCAF4O95104 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCAF4O95104 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.33■□□□□ 0.69
SCAF4O95104 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCAF4O95104 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.33■□□□□ 0.68
SCAF4O95104 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCAF4O95104 AC022211.4-201ENST00000625094 2161 ntBASIC19.33■□□□□ 0.68
SCAF4O95104 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCAF4O95104 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAF4O95104 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAF4O95104 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCAF4O95104 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SCAF4O95104 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAF4O95104 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAF4O95104 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAF4O95104 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAF4O95104 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCAF4O95104 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAF4O95104 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAF4O95104 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAF4O95104 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAF4O95104 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAF4O95104 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAF4O95104 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SCAF4O95104 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAF4O95104 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SCAF4O95104 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAF4O95104 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAF4O95104 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCAF4O95104 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.3■□□□□ 0.68
SCAF4O95104 AC079834.2-201ENST00000609776 1949 ntBASIC19.3■□□□□ 0.68
SCAF4O95104 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAF4O95104 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.3■□□□□ 0.68
SCAF4O95104 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAF4O95104 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.3■□□□□ 0.68
SCAF4O95104 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SCAF4O95104 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAF4O95104 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCAF4O95104 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAF4O95104 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAF4O95104 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAF4O95104 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.29■□□□□ 0.68
SCAF4O95104 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.29■□□□□ 0.68
SCAF4O95104 AC068473.5-201ENST00000616428 2072 ntBASIC19.29■□□□□ 0.68
SCAF4O95104 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
SCAF4O95104 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCAF4O95104 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAF4O95104 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.28■□□□□ 0.68
SCAF4O95104 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.28■□□□□ 0.68
SCAF4O95104 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCAF4O95104 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.27■□□□□ 0.68
SCAF4O95104 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAF4O95104 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCAF4O95104 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCAF4O95104 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCAF4O95104 DUX4L13-201ENST00000554103 1267 ntBASIC19.27■□□□□ 0.68
SCAF4O95104 DUX4L15-201ENST00000611059 1267 ntBASIC19.27■□□□□ 0.68
SCAF4O95104 DUX4L23-201ENST00000615195 1269 ntBASIC19.27■□□□□ 0.68
SCAF4O95104 DUX4L24-201ENST00000617576 1269 ntBASIC19.27■□□□□ 0.68
SCAF4O95104 DUX4L22-201ENST00000618238 1269 ntBASIC19.27■□□□□ 0.68
SCAF4O95104 DUX4L20-201ENST00000619712 1269 ntBASIC19.27■□□□□ 0.68
SCAF4O95104 DUX4L21-201ENST00000622058 1269 ntBASIC19.27■□□□□ 0.68
SCAF4O95104 DUX4L10-201ENST00000622460 1267 ntBASIC19.27■□□□□ 0.68
SCAF4O95104 DUX4L25-201ENST00000624915 1269 ntBASIC19.27■□□□□ 0.68
SCAF4O95104 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCAF4O95104 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAF4O95104 AC138932.3-201ENST00000567634 1902 ntBASIC19.27■□□□□ 0.67
SCAF4O95104 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCAF4O95104 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCAF4O95104 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCAF4O95104 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.26■□□□□ 0.67
SCAF4O95104 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.26■□□□□ 0.67
SCAF4O95104 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCAF4O95104 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCAF4O95104 AP003733.4-201ENST00000623785 1697 ntBASIC19.26■□□□□ 0.67
SCAF4O95104 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCAF4O95104 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.25■□□□□ 0.67
SCAF4O95104 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.25■□□□□ 0.67
SCAF4O95104 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.25■□□□□ 0.67
SCAF4O95104 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.25■□□□□ 0.67
SCAF4O95104 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.25■□□□□ 0.67
SCAF4O95104 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAF4O95104 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms