Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.12■■□□□ 1.13
TRIM3O75382 DUX4L18-201ENST00000553347 1267 ntBASIC22.12■■□□□ 1.13
TRIM3O75382 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM3O75382 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
TRIM3O75382 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM3O75382 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.11■■□□□ 1.13
TRIM3O75382 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.11■■□□□ 1.13
TRIM3O75382 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM3O75382 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.11■■□□□ 1.13
TRIM3O75382 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.11■■□□□ 1.13
TRIM3O75382 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM3O75382 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
TRIM3O75382 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM3O75382 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM3O75382 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM3O75382 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRIM3O75382 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRIM3O75382 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRIM3O75382 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.1■■□□□ 1.13
TRIM3O75382 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRIM3O75382 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
TRIM3O75382 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRIM3O75382 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.09■■□□□ 1.13
TRIM3O75382 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.09■■□□□ 1.13
TRIM3O75382 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRIM3O75382 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRIM3O75382 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRIM3O75382 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.09■■□□□ 1.13
TRIM3O75382 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.09■■□□□ 1.13
TRIM3O75382 AC018755.3-202ENST00000596210 929 ntBASIC22.09■■□□□ 1.13
TRIM3O75382 MIR6765-201ENST00000614092 87 ntBASIC22.09■■□□□ 1.13
TRIM3O75382 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRIM3O75382 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRIM3O75382 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRIM3O75382 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRIM3O75382 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRIM3O75382 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRIM3O75382 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.08■■□□□ 1.13
TRIM3O75382 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRIM3O75382 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRIM3O75382 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRIM3O75382 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRIM3O75382 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.08■■□□□ 1.12
TRIM3O75382 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.08■■□□□ 1.12
TRIM3O75382 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM3O75382 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
TRIM3O75382 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRIM3O75382 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.07■■□□□ 1.12
TRIM3O75382 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.07■■□□□ 1.12
TRIM3O75382 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
TRIM3O75382 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TRIM3O75382 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM3O75382 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM3O75382 AC091060.1-201ENST00000623524 1766 ntBASIC22.06■■□□□ 1.12
TRIM3O75382 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TRIM3O75382 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRIM3O75382 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM3O75382 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM3O75382 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM3O75382 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM3O75382 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRIM3O75382 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
TRIM3O75382 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM3O75382 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.04■■□□□ 1.12
TRIM3O75382 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM3O75382 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.04■■□□□ 1.12
TRIM3O75382 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM3O75382 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM3O75382 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TRIM3O75382 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM3O75382 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRIM3O75382 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
TRIM3O75382 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM3O75382 AC145676.1-201ENST00000514988 2004 ntBASIC22.03■■□□□ 1.12
TRIM3O75382 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM3O75382 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM3O75382 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.03■■□□□ 1.12
TRIM3O75382 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM3O75382 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.02■■□□□ 1.12
TRIM3O75382 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.02■■□□□ 1.12
TRIM3O75382 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
TRIM3O75382 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM3O75382 AC020928.2-201ENST00000588717 2197 ntBASIC22.02■■□□□ 1.12
TRIM3O75382 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM3O75382 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM3O75382 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
TRIM3O75382 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.01■■□□□ 1.11
TRIM3O75382 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
TRIM3O75382 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.01■■□□□ 1.11
TRIM3O75382 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.01■■□□□ 1.11
TRIM3O75382 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22■■□□□ 1.11
TRIM3O75382 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TRIM3O75382 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM3O75382 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
TRIM3O75382 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM3O75382 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22■■□□□ 1.11
TRIM3O75382 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22■■□□□ 1.11
TRIM3O75382 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM3O75382 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM3O75382 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms