Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
TRIM13O60858 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.47■■□□□ 1.35
TRIM13O60858 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM13O60858 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM13O60858 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM13O60858 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
TRIM13O60858 LINC01124-201ENST00000409786 2117 ntBASIC23.46■■□□□ 1.35
TRIM13O60858 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM13O60858 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM13O60858 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.46■■□□□ 1.35
TRIM13O60858 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM13O60858 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
TRIM13O60858 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.45■■□□□ 1.35
TRIM13O60858 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TRIM13O60858 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
TRIM13O60858 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.45■■□□□ 1.34
TRIM13O60858 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRIM13O60858 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
TRIM13O60858 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
TRIM13O60858 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRIM13O60858 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.44■■□□□ 1.34
TRIM13O60858 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.44■■□□□ 1.34
TRIM13O60858 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.44■■□□□ 1.34
TRIM13O60858 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.44■■□□□ 1.34
TRIM13O60858 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
TRIM13O60858 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM13O60858 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRIM13O60858 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.43■■□□□ 1.34
TRIM13O60858 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.42■■□□□ 1.34
TRIM13O60858 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
TRIM13O60858 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM13O60858 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM13O60858 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM13O60858 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.42■■□□□ 1.34
TRIM13O60858 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM13O60858 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.42■■□□□ 1.34
TRIM13O60858 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM13O60858 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
TRIM13O60858 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
TRIM13O60858 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM13O60858 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
TRIM13O60858 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.41■■□□□ 1.34
TRIM13O60858 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM13O60858 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM13O60858 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
TRIM13O60858 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM13O60858 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.41■■□□□ 1.34
TRIM13O60858 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM13O60858 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM13O60858 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM13O60858 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.4■■□□□ 1.34
TRIM13O60858 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM13O60858 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM13O60858 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM13O60858 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM13O60858 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM13O60858 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM13O60858 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM13O60858 CR559946.2-201ENST00000623684 991 ntBASIC23.39■■□□□ 1.33
TRIM13O60858 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TRIM13O60858 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM13O60858 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM13O60858 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM13O60858 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM13O60858 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM13O60858 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM13O60858 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM13O60858 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM13O60858 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM13O60858 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM13O60858 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM13O60858 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM13O60858 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM13O60858 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM13O60858 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM13O60858 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM13O60858 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM13O60858 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM13O60858 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM13O60858 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM13O60858 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM13O60858 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM13O60858 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM13O60858 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM13O60858 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM13O60858 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM13O60858 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM13O60858 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM13O60858 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM13O60858 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TRIM13O60858 LINC00543-201ENST00000567234 1845 ntBASIC23.34■■□□□ 1.33
TRIM13O60858 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM13O60858 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM13O60858 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM13O60858 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM13O60858 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM13O60858 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
TRIM13O60858 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM13O60858 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM13O60858 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms