Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 AL139125.2-201ENST00000623134 1869 ntBASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV16A0A0A6YYK6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 AC008813.1-201ENST00000536597 885 ntBASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV16A0A0A6YYK6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAV16A0A0A6YYK6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV16A0A0A6YYK6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 AC018358.1-201ENST00000631079 1402 ntBASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV16A0A0A6YYK6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV16A0A0A6YYK6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV16A0A0A6YYK6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 CLDN5-201ENST00000403084 2357 ntBASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV16A0A0A6YYK6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV16A0A0A6YYK6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV16A0A0A6YYK6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV16A0A0A6YYK6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV16A0A0A6YYK6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV16A0A0A6YYK6 MIR3648-2-201ENST00000581792 180 ntBASIC16.42■□□□□ 0.22
TRAV16A0A0A6YYK6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV16A0A0A6YYK6 MIR3648-1-201ENST00000615959 180 ntBASIC16.42■□□□□ 0.22
TRAV16A0A0A6YYK6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV16A0A0A6YYK6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV16A0A0A6YYK6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms