Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV26-1A0A087WT03 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 AC026202.3-201ENST00000600805 1127 ntBASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 AC009831.1-201ENST00000580420 1582 ntBASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV26-1A0A087WT03 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV26-1A0A087WT03 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV26-1A0A087WT03 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
TRAV26-1A0A087WT03 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV26-1A0A087WT03 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV26-1A0A087WT03 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV26-1A0A087WT03 NTF6A-201ENST00000591175 560 ntBASIC17.05■□□□□ 0.32
TRAV26-1A0A087WT03 U85056.1-201ENST00000616429 682 ntBASIC17.05■□□□□ 0.32
TRAV26-1A0A087WT03 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRAV26-1A0A087WT03 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV26-1A0A087WT03 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAV26-1A0A087WT03 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV26-1A0A087WT03 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV26-1A0A087WT03 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV26-1A0A087WT03 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV26-1A0A087WT03 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV26-1A0A087WT03 RAP2CP1-202ENST00000605179 643 ntBASIC17.02■□□□□ 0.32
TRAV26-1A0A087WT03 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV26-1A0A087WT03 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV26-1A0A087WT03 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV26-1A0A087WT03 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRAV26-1A0A087WT03 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAV26-1A0A087WT03 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV26-1A0A087WT03 AL592293.1-201ENST00000502889 1188 ntBASIC17■□□□□ 0.31
TRAV26-1A0A087WT03 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV26-1A0A087WT03 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV26-1A0A087WT03 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV26-1A0A087WT03 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV26-1A0A087WT03 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV26-1A0A087WT03 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV26-1A0A087WT03 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRAV26-1A0A087WT03 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV26-1A0A087WT03 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV26-1A0A087WT03 KRT18P60-201ENST00000312876 1297 ntBASIC16.98■□□□□ 0.31
TRAV26-1A0A087WT03 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.98■□□□□ 0.31
TRAV26-1A0A087WT03 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV26-1A0A087WT03 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV26-1A0A087WT03 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV26-1A0A087WT03 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV26-1A0A087WT03 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV26-1A0A087WT03 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV26-1A0A087WT03 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV26-1A0A087WT03 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV26-1A0A087WT03 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV26-1A0A087WT03 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV26-1A0A087WT03 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV26-1A0A087WT03 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms