Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 GGT4P-201ENST00000623672 1708 ntBASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.68□□□□□ -0.54
UBE2D4Q9Y2X8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 AC092384.3-202ENST00000564646 2873 ntBASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 INTS4P1-201ENST00000438455 1935 ntBASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 SPDYE21P-201ENST00000413323 827 ntBASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 AC063952.2-201ENST00000498792 1227 ntBASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 AC063926.3-201ENST00000624734 5658 ntBASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBE2D4Q9Y2X8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBE2D4Q9Y2X8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms