Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 RCN1P2-201ENST00000398357 915 ntBASIC18.69■□□□□ 0.58
CBX8Q9HC52 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 VENTXP7-201ENST00000475503 772 ntBASIC18.69■□□□□ 0.58
CBX8Q9HC52 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CBX8Q9HC52 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CBX8Q9HC52 AC022532.1-201ENST00000624563 1728 ntBASIC18.69■□□□□ 0.58
CBX8Q9HC52 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 AL356309.3-201ENST00000624132 1934 ntBASIC18.68■□□□□ 0.58
CBX8Q9HC52 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 NTF6B-201ENST00000591913 560 ntBASIC18.68■□□□□ 0.58
CBX8Q9HC52 BNIP3P18-201ENST00000593976 575 ntBASIC18.68■□□□□ 0.58
CBX8Q9HC52 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.68■□□□□ 0.58
CBX8Q9HC52 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CBX8Q9HC52 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 LINC02447-202ENST00000501888 2146 ntBASIC18.67■□□□□ 0.58
CBX8Q9HC52 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms