Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE1Q99829 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.73■□□□□ 0.27
CPNE1Q99829 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE1Q99829 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE1Q99829 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE1Q99829 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE1Q99829 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.73■□□□□ 0.27
CPNE1Q99829 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE1Q99829 AL805961.1-202ENST00000641562 540 ntBASIC16.73■□□□□ 0.27
CPNE1Q99829 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPNE1Q99829 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE1Q99829 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE1Q99829 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CPNE1Q99829 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE1Q99829 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE1Q99829 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.72■□□□□ 0.27
CPNE1Q99829 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 AC008894.3-201ENST00000624324 3103 ntBASIC16.72■□□□□ 0.27
CPNE1Q99829 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CPNE1Q99829 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE1Q99829 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE1Q99829 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CPNE1Q99829 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE1Q99829 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CPNE1Q99829 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CPNE1Q99829 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE1Q99829 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE1Q99829 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE1Q99829 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE1Q99829 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CPNE1Q99829 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE1Q99829 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE1Q99829 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CPNE1Q99829 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE1Q99829 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE1Q99829 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE1Q99829 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE1Q99829 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.71■□□□□ 0.27
CPNE1Q99829 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.71■□□□□ 0.27
CPNE1Q99829 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CPNE1Q99829 SLC25A6P2-201ENST00000497974 877 ntBASIC16.71■□□□□ 0.27
CPNE1Q99829 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CPNE1Q99829 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.71■□□□□ 0.27
CPNE1Q99829 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.71■□□□□ 0.27
CPNE1Q99829 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms