Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TTC9CQ8N5M4 AL118508.1-201ENST00000613502 2345 ntBASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 AC107918.2-201ENST00000530817 355 ntBASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 AP001350.2-201ENST00000625104 1094 ntBASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 AC131009.4-201ENST00000624048 1740 ntBASIC13.25□□□□□ -0.29
TTC9CQ8N5M4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 AC092910.1-201ENST00000482027 1129 ntBASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TTC9CQ8N5M4 AL162727.3-201ENST00000635661 2787 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms