Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.83■□□□□ 0.28
MDH1P40925 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 AL109954.1-202ENST00000564051 2148 ntBASIC16.82■□□□□ 0.28
MDH1P40925 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MDH1P40925 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
MDH1P40925 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
MDH1P40925 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.82■□□□□ 0.28
MDH1P40925 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 AL353692.3-201ENST00000407031 1396 ntBASIC16.82■□□□□ 0.28
MDH1P40925 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 UNC93B2-201ENST00000285383 730 ntBASIC16.82■□□□□ 0.28
MDH1P40925 INGX-201ENST00000359239 846 ntBASIC16.82■□□□□ 0.28
MDH1P40925 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.82■□□□□ 0.28
MDH1P40925 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.82■□□□□ 0.28
MDH1P40925 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.82■□□□□ 0.28
MDH1P40925 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.82■□□□□ 0.28
MDH1P40925 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.82■□□□□ 0.28
MDH1P40925 AC073912.3-201ENST00000624414 853 ntBASIC16.82■□□□□ 0.28
MDH1P40925 AL671710.1-201ENST00000610245 2349 ntBASIC16.82■□□□□ 0.28
MDH1P40925 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.82■□□□□ 0.28
MDH1P40925 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MDH1P40925 AC106881.1-201ENST00000605849 3329 ntBASIC16.81■□□□□ 0.28
MDH1P40925 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MDH1P40925 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MDH1P40925 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MDH1P40925 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MDH1P40925 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 IGHGP-201ENST00000390555 1178 ntBASIC16.81■□□□□ 0.28
MDH1P40925 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 RBM17P1-201ENST00000453646 1190 ntBASIC16.81■□□□□ 0.28
MDH1P40925 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 STK19B-204ENST00000512515 211 ntBASIC16.81■□□□□ 0.28
MDH1P40925 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.81■□□□□ 0.28
MDH1P40925 CD99P1-205ENST00000527459 561 ntBASIC16.81■□□□□ 0.28
MDH1P40925 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 FITM1-202ENST00000559294 800 ntBASIC16.81■□□□□ 0.28
MDH1P40925 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.81■□□□□ 0.28
MDH1P40925 C2orf69P3-201ENST00000565542 1120 ntBASIC16.81■□□□□ 0.28
MDH1P40925 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.81■□□□□ 0.28
MDH1P40925 AL512604.3-201ENST00000569583 964 ntBASIC16.81■□□□□ 0.28
MDH1P40925 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.81■□□□□ 0.28
MDH1P40925 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.81■□□□□ 0.28
MDH1P40925 AC026471.5-201ENST00000615068 467 ntBASIC16.81■□□□□ 0.28
MDH1P40925 AL359736.2-201ENST00000621992 437 ntBASIC16.81■□□□□ 0.28
MDH1P40925 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MDH1P40925 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MDH1P40925 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.81■□□□□ 0.28
MDH1P40925 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MDH1P40925 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.8■□□□□ 0.28
MDH1P40925 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MDH1P40925 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MDH1P40925 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MDH1P40925 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MDH1P40925 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.8■□□□□ 0.28
MDH1P40925 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.8■□□□□ 0.28
MDH1P40925 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.8■□□□□ 0.28
MDH1P40925 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.8■□□□□ 0.28
MDH1P40925 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MDH1P40925 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.8■□□□□ 0.28
MDH1P40925 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms