Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA3P32297 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA3P32297 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA3P32297 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA3P32297 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
CHRNA3P32297 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA3P32297 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA3P32297 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CHRNA3P32297 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA3P32297 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA3P32297 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA3P32297 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA3P32297 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA3P32297 ACTG1P4-201ENST00000425123 1122 ntBASIC17.66■□□□□ 0.42
CHRNA3P32297 RPL13AP23-201ENST00000480739 586 ntBASIC17.66■□□□□ 0.42
CHRNA3P32297 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA3P32297 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA3P32297 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA3P32297 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA3P32297 MTHFR-217ENST00000641820 1569 ntBASIC17.66■□□□□ 0.42
CHRNA3P32297 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA3P32297 AL021920.2-201ENST00000624828 1351 ntBASIC17.66■□□□□ 0.42
CHRNA3P32297 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRNA3P32297 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CHRNA3P32297 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNA3P32297 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNA3P32297 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNA3P32297 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 AL589182.2-201ENST00000619332 1049 ntBASIC17.65■□□□□ 0.42
CHRNA3P32297 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRNA3P32297 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRNA3P32297 ME2P1-201ENST00000426028 1970 ntBASIC17.65■□□□□ 0.42
CHRNA3P32297 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 AC006538.1-201ENST00000567905 1585 ntBASIC17.65■□□□□ 0.42
CHRNA3P32297 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA3P32297 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA3P32297 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRNA3P32297 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA3P32297 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA3P32297 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHRNA3P32297 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.64■□□□□ 0.42
CHRNA3P32297 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CHRNA3P32297 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
CHRNA3P32297 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA3P32297 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 AP002414.3-201ENST00000589352 1468 ntBASIC17.64■□□□□ 0.41
CHRNA3P32297 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA3P32297 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNA3P32297 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRNA3P32297 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRNA3P32297 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.64■□□□□ 0.41
CHRNA3P32297 AC098831.1-202ENST00000438821 336 ntBASIC17.64■□□□□ 0.41
CHRNA3P32297 IGHV3-22-201ENST00000520721 359 ntBASIC17.64■□□□□ 0.41
CHRNA3P32297 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA3P32297 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRNA3P32297 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms