Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRAP04437 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TCRAP04437 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TCRAP04437 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.77□□□□□ -0.36
TCRAP04437 AC126755.1-201ENST00000525846 6405 ntBASIC12.77□□□□□ -0.36
TCRAP04437 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TCRAP04437 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
TCRAP04437 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.77□□□□□ -0.36
TCRAP04437 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TCRAP04437 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TCRAP04437 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.77□□□□□ -0.36
TCRAP04437 AC006449.6-201ENST00000612330 2296 ntBASIC12.77□□□□□ -0.36
TCRAP04437 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
TCRAP04437 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.77□□□□□ -0.36
TCRAP04437 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
TCRAP04437 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.77□□□□□ -0.36
TCRAP04437 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.77□□□□□ -0.37
TCRAP04437 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRAP04437 AC113347.1-201ENST00000413321 391 ntBASIC12.77□□□□□ -0.37
TCRAP04437 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 AC246785.2-201ENST00000432512 513 ntBASIC12.77□□□□□ -0.37
TCRAP04437 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
TCRAP04437 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRAP04437 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.77□□□□□ -0.37
TCRAP04437 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.77□□□□□ -0.37
TCRAP04437 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 AC011467.2-201ENST00000598425 242 ntBASIC12.77□□□□□ -0.37
TCRAP04437 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRAP04437 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.77□□□□□ -0.37
TCRAP04437 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.77□□□□□ -0.37
TCRAP04437 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.77□□□□□ -0.37
TCRAP04437 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.77□□□□□ -0.37
TCRAP04437 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.77□□□□□ -0.37
TCRAP04437 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.77□□□□□ -0.37
TCRAP04437 AC010491.1-201ENST00000563101 2797 ntBASIC12.77□□□□□ -0.37
TCRAP04437 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.77□□□□□ -0.37
TCRAP04437 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.77□□□□□ -0.37
TCRAP04437 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TCRAP04437 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRAP04437 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TCRAP04437 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRAP04437 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRAP04437 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
TCRAP04437 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 SPDYE13P-201ENST00000445314 798 ntBASIC12.76□□□□□ -0.37
TCRAP04437 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.76□□□□□ -0.37
TCRAP04437 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRAP04437 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
TCRAP04437 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.76□□□□□ -0.37
TCRAP04437 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.76□□□□□ -0.37
TCRAP04437 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.76□□□□□ -0.37
TCRAP04437 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.76□□□□□ -0.37
TCRAP04437 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TCRAP04437 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.76□□□□□ -0.37
TCRAP04437 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TCRAP04437 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.76□□□□□ -0.37
TCRAP04437 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TCRAP04437 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms