Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 UPK3BP1-201ENST00000428678 509 ntBASIC14.99□□□□□ -0.01
TVP23AA6NH52 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TVP23AA6NH52 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TVP23AA6NH52 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 AC006538.1-201ENST00000567905 1585 ntBASIC14.98□□□□□ -0.01
TVP23AA6NH52 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 AC006277.1-201ENST00000624348 1610 ntBASIC14.98□□□□□ -0.01
TVP23AA6NH52 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TVP23AA6NH52 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.98□□□□□ -0.01
TVP23AA6NH52 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 MIR1224-201ENST00000408193 85 ntBASIC14.97□□□□□ -0.01
TVP23AA6NH52 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 MIR3652-201ENST00000579335 131 ntBASIC14.97□□□□□ -0.01
TVP23AA6NH52 AL139288.1-201ENST00000623748 933 ntBASIC14.97□□□□□ -0.01
TVP23AA6NH52 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TVP23AA6NH52 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.97□□□□□ -0.01
TVP23AA6NH52 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms