Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DUXBA0A1W2PPF3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.7□□□□□ -0.22
DUXBA0A1W2PPF3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUXBA0A1W2PPF3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DUXBA0A1W2PPF3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 AC006058.4-201ENST00000624016 1670 ntBASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 AL845331.1-201ENST00000424978 1190 ntBASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 AC010203.1-204ENST00000548782 407 ntBASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 AC139887.4-201ENST00000607877 719 ntBASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 HYMAI.1-201ENST00000620949 238 ntBASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DUXBA0A1W2PPF3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUXBA0A1W2PPF3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms